Turneriella parva: Turpa_2884
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Entry
Turpa_2884 CDS
T02157
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tpx
Turneriella parva
Pathway
tpx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Turpa_2884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpx03021
]
Turpa_2884
03400 DNA repair and recombination proteins [BR:
tpx03400
]
Turpa_2884
Enzymes [BR:
tpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Turpa_2884
Transcription machinery [BR:
tpx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Turpa_2884
DNA repair and recombination proteins [BR:
tpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Turpa_2884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AFM13523
UniProt:
I4B8B6
LinkDB
All DBs
Position
3005834..3009574
Genome browser
AA seq
1246 aa
AA seq
DB search
MSDSNVVRVGEDTSSFKIVNFGSISKSLDIPPLIEVQTASYNEFLQVDTSAAKRKRIGLQ
SVFEDSFPIESSNGDVVLEFVEYTLGEPKRDIWDCKVNGLTYAAPLKATIRLIAIETGEV
REQEVYMGDLPMMSPTGTFIINGAERVIVNQLHRSPGIFIFFDDAKNIFSSRIIPDHKGS
WLEFEMDAKGLLIARIDRRKKFPFTLLLKALGYGTNEQILRLFYESESVTIKGVQSKALQ
KFIGRRILTDVANPETGEILIEAGQALNEDNLDILKDAKIDKIEVIVNKGAVDHRVVFQS
LDKDGVNSTEEALMEFIKHQKPLDYSPDHGDAEKRVKNIERASAELHRLFFDPKTYNMGS
VGRYKINARFKHLNSKEFGENADTQTLRPIDIVETCKYMVNLIHEVPGYQYDDIDHLGNR
RVRTVGELLTTQMKAGFTRMERVVKERMSMNDVDIMTPQLLISIKPITAVINEFFGASQL
SQFMDQTNPLSEITHKRRLNALGPGGLTRERAGFEVRDVHYTHYGRLCPIETPEGPNIGL
ITSMATYSRLNPYGFVETPYRVVEKGKDTGKTMFLSANEEDHYVVAQANAKLGEDGAFLD
KLVSCRYRGDFPLKSPEEIQLMDVAPTQVISLSTSLIPFLEHDDANRALMGSNMQRQAVP
LLTPDMPFVGTGMELPIAYDSGVCVIADRDGVVTKVDADAIEVEREDGTKDKYRLVKFKR
TNQSTTLNHQALVGCHNAPENGKIISISKTEMRLEAENGKIFSFPMVTFQGSMKPFVQEG
AFVYRGDLLAGEIIKGRLDQPNRNNARKATILADGLATKMGRLALGKNITVAFMPWDGYN
FEDAIILSEKLVKNDTFTSIHIEEFEIQARETKLGREIITRDIPNISERAFRDLDDEGII
RVGAEVRAGDILVGMVTPKGETDLTPEYRLLHSIFGEKAKEVRDSSLRVPNGHAGIVVDI
VRFKRDEGDELPAGIVEAVKVYVAQKRKISVGDKMAGRHGNKGVISTILNEADMPMLPDG
TPIDIVLNPLGVPSRMNLGQIFETQLAYIGKTLGIHFETPVFDGAKWEDVQDYAQKAKLA
SHSKIPLRDGRTGDYFLQPAFVGTIYMLKLHHMVEDKMHARSTGPYSLVTQQPLGGKAQF
GGQRLGEMEVWALEAYGAAHTLQELLTVKSDDMQGRARVYESIVKGIHAIKPGVPESFNV
LIREIRSLALDITILDSEGRPIEISDMDDEFSRIRRRIKVDSVENT
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattctaatgtcgtccgagtaggcgaggatacctcgtcgttcaagattgtcaat
tttgggagcatcagcaaatcgctggatatcccgcctcttatcgaggtgcagactgcttcg
tataacgaatttctgcaggtagacacgtcggcggccaagcgcaagcgcatcggtctgcag
tcagtctttgaagatagtttcccgatcgaaagctcaaacggcgacgttgtgcttgaattt
gtcgagtatactctcggcgaaccaaaacgcgacatctgggattgcaaagtaaacggatta
acttacgctgcgccgctgaaggcgacaattcgcctcatcgcgattgaaaccggcgaagtg
cgcgaacaagaagtctacatgggtgatctgccgatgatgtcgccaaccggcacattcatc
atcaatggagctgaacgcgttattgttaaccagcttcaccgttctccaggtatctttatt
ttctttgatgacgcgaagaatattttctcatcgcgcattatacctgaccataaaggttca
tggctcgaattcgaaatggacgccaaaggcctcttgattgcgcgcatcgatcgccgcaag
aagttccctttcacgctgctgttgaaagcgctcggttacggaaccaacgagcagattctg
cgcctcttctacgagtcagaatcagtgacgatcaaaggcgtacagtcaaaagcgttgcag
aaatttatcgggcgccgcattctcacagacgtcgccaaccctgaaacgggtgaaatactc
atagaagcaggtcaggcgctcaacgaagataaccttgacatactcaaagacgccaaaatt
gacaaaatcgaagtaattgtgaacaagggtgcggtagaccaccgcgttgtgtttcagtcg
ctcgacaaagacggcgtcaattcaaccgaagaagcgctgatggagttcatcaagcaccag
aagccactcgactacagtcccgaccacggtgacgctgaaaagcgtgtgaagaacatcgaa
cgggcgagtgcagagctgcaccgcctgttcttcgacccaaaaacctacaacatgggcagc
gtcggtcgttacaagattaatgcacgcttcaagcacctgaacagcaaagagttcggcgaa
aatgcggacacgcaaaccctgcgccccatcgatatcgtcgaaacctgcaagtacatggtg
aatctgattcatgaagttcctggttaccaatacgacgatatcgaccacttgggtaaccgc
cgcgtgcgcacggtgggcgaacttctgaccacgcagatgaaggccggcttcacgcgcatg
gagcgtgtggtgaaagagcgtatgagcatgaatgacgtcgatatcatgacgccgcagctg
ctcatctcgattaagccaattacagcggtcatcaacgaattttttggtgcgagccaattg
tctcagttcatggaccagacgaaccccctgtctgaaattacgcataaacgccgcctcaac
gctctcgggccaggtggcctcacgcgcgaacgcgccggtttcgaagtgcgcgacgtgcac
tacacgcattatggccgcctctgcccgattgaaaccccagaaggcccaaacatcggcctc
atcacttcaatggcgacgtactcgcgccttaacccctacggtttcgtcgaaacaccctac
cgtgttgtagagaagggtaaagataccggcaagacgatgttcttgtctgccaacgaagaa
gaccattacgtcgtcgctcaggcaaacgcaaagttgggcgaagacggtgcatttctcgac
aaacttgtcagctgccgctatcgcggtgactttccgctgaagtcgcctgaagaaattcag
ctgatggatgtagccccgacacaggttatttcgctctccacgagccttattccgtttctc
gaacacgacgacgccaaccgtgcgctcatgggttcgaacatgcaacgccaggcagtgcct
cttctgacccccgatatgccgtttgtcggcacgggtatggaactgcccattgcctatgat
tcgggcgtgtgtgtgattgcagaccgcgacggtgtggtgacgaaagtcgacgctgacgcg
atcgaagtcgaacgcgaagatggtaccaaagataaataccgtctcgtgaagttcaagcgc
acgaaccagagcacaacgctcaaccaccaggcgctcgtcgggtgccacaatgcgcccgaa
aacggcaaaatcatttcgatctccaaaacggaaatgcgcctcgaagctgagaacggcaaa
atcttcagctttccgatggtgacatttcagggcagcatgaagccgttcgtacaagagggc
gcttttgtataccgcggtgacctgctcgcaggtgaaatcatcaaaggccgtctcgaccag
cccaaccgcaacaatgcgcgcaaagcgacaattctcgctgacggtctcgcgacgaagatg
ggcaggctcgcgctcggcaagaacatcaccgtggccttcatgccatgggacggttataac
ttcgaagatgcgatcattctttcagagaagctcgtgaagaatgacacatttacgagtatt
cacattgaagaatttgagattcaggcccgtgaaaccaaactcggccgggaaatcatcacc
cgtgatattccgaatatcagcgagcgtgcatttcgcgatctcgacgatgaaggcatcatt
cgggtgggcgcagaagtgcgtgccggtgatattctcgtgggcatggtaactcctaaagga
gaaaccgatctgacccctgaataccgactgctgcactcgatcttcggcgaaaaagcgaaa
gaagtgcgcgactcatcgctgcgtgtgcccaacggccatgcaggtatcgtggtcgatatc
gtacgcttcaagcgcgacgagggcgacgaactgccagcaggcattgtcgaagcagtcaag
gtttatgtagcgcagaagcgtaaaatttctgtcggcgacaagatggcgggccgtcacggt
aacaaaggcgttatctcgaccattctgaacgaggccgatatgccgatgctgcccgatggc
acgcccattgatatcgttctgaatcccctcggtgtaccttcacgtatgaacctcggtcag
atttttgaaacgcagctcgcgtacatcggcaagacgctcggtatccattttgaaaccccg
gtctttgacggtgcaaaatgggaagacgtgcaagactatgcgcagaaggcaaagcttgct
tcgcattcaaagattccgcttcgcgatggtcgtacgggcgactatttcttgcagccggct
tttgtgggcacgatctatatgctgaagcttcaccacatggttgaagacaaaatgcatgca
aggtcaactggcccttattcactcgtcacgcaacaacctctgggcggcaaagcgcagttt
ggtggccagcgtctcggtgaaatggaagtctgggcgcttgaagcgtacggcgcggcacac
acgctgcaagagcttctgactgtgaagtcagacgacatgcagggccgcgcgcgcgtctat
gaatcgattgtgaaaggtattcacgcgattaagccaggcgtacccgaaagctttaacgtt
ctcattcgtgagatacgttcactcgcgctcgatattacgattctcgactctgaagggaga
ccgatcgagatttcagatatggatgacgagttttcacggatcagacgtcgcattaaagtc
gattcggtagagaatacttga
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integrated database retrieval system
