KEGG   Turneriella parva: Turpa_3107
Entry
Turpa_3107        CDS       T02157                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K10857  exodeoxyribonuclease X [EC:3.1.11.-]
Organism
tpx  Turneriella parva
Pathway
tpx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tpx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Turpa_3107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpx03400]
    Turpa_3107
DNA repair and recombination proteins [BR:tpx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Turpa_3107
SSDB
Motif
Pfam: RNase_T ExoX-like_C QSregVF_b RNase_H_2 DUF6183
Other DBs
NCBI-ProteinID: AFM13746
UniProt: I4B8Y9
LinkDB
Position
3248178..3248930
AA seq 250 aa
MEQLLFGDADVATKSLPHLVFLDTETTGTEPGKDKICQVCFIDGETLRTEFFKPPFAIPV
KAMSIHHITNKMVEGKPPFAGSEMQRDLQARLETGVLVAHNAPFDISMLVAEGVQVNRFI
CTYRVAFALDRNDALPEYNLQYLRYAFGLEIEAAAHDAEGDVKVLRGVFEHLLRLLSSET
GSEAEAIEQMIRISEQPMLFRKINFGKYRDHRLADLAKTDRGYLEWLLAQKLKSGDEGDW
VYSLQHYLKR
NT seq 753 nt   +upstreamnt  +downstreamnt
atggaacaacttctctttggcgatgccgacgtggcaacaaagtcgctaccgcaccttgta
tttttggatacggaaacgaccggcaccgaacccggcaaagacaagatttgtcaggtatgt
ttcatcgatggcgaaactctgcgcactgagtttttcaagcccccgttcgcgattcctgtg
aaggcgatgagcattcaccacatcaccaacaagatggtcgagggcaagccgccctttgct
ggcagcgaaatgcaacgtgacttgcaggcgcgccttgagacaggtgttctcgttgcgcat
aacgccccgtttgatatcagcatgctggtcgcagaaggagttcaggttaaccggttcatc
tgtacctatcgcgtggccttcgcgctcgaccgtaacgatgctctgcccgaatataacctt
caatacctgcgttatgcctttgggttagaaattgaagccgcagcccacgacgccgagggg
gatgtcaaagtgttgcgcggcgttttcgaacatctgttgcggcttttgagttcagaaaca
ggctctgaggctgaagcgattgaacagatgatcagaatctcagagcagccgatgctgttt
cgcaaaatcaatttcggcaaataccgtgaccatcgcctcgctgatcttgccaaaaccgac
cgcggttacctcgagtggctgctcgcgcaaaaactcaaaagtggtgacgaaggtgattgg
gtctacagcctgcagcactacctgaaaaggtag

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