Turneriella parva: Turpa_4016
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Entry
Turpa_4016 CDS
T02157
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tpx
Turneriella parva
Pathway
tpx00061
Fatty acid biosynthesis
tpx00071
Fatty acid degradation
tpx01100
Metabolic pathways
tpx01212
Fatty acid metabolism
tpx02024
Quorum sensing
tpx04146
Peroxisome
Module
tpx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tpx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Turpa_4016
00071 Fatty acid degradation
Turpa_4016
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Turpa_4016
09145 Cellular community - prokaryotes
02024 Quorum sensing
Turpa_4016
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tpx01004
]
Turpa_4016
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpx04147
]
Turpa_4016
Enzymes [BR:
tpx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Turpa_4016
Lipid biosynthesis proteins [BR:
tpx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Turpa_4016
Exosome [BR:
tpx04147
]
Exosomal proteins
Exosomal proteins of breast milk
Turpa_4016
Exosomal proteins of breast cancer cells
Turpa_4016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AFM14650
UniProt:
I4BBJ3
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All DBs
Position
4199251..4201146
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AA seq
631 aa
AA seq
DB search
MQKPKTFYDLFAYAAEQKPALETFKIRKKSGVIQGRTFKRIHELVTELAAGLKSAGVAAD
DRVTLLCDSSPNWILADAAIVAAGAVCVPRGTDVTDDDILYIVGHSESRWAIVQKAKDRD
RLLKFQKELPALEKIWVLEDDDSELAAGESSAEELLALGKTALHKDSALVIKLNASADPA
KMATIIYTSGTTGAPKGVMLNQTGWLNALGRALEMKVITEKDTALSLLPPWHAFERAVEY
GVMMAQCEFMISGINTLRQDLGDFKPTSFPSVPRIWESLYNGIMQKLEKESPVKRNVFYF
FLDVGAAWAKHEAIFNGYDLQVKPKPALQQVLDRAASGAVLAALLPLKLASQAVFAPIHQ
ALGGNVSKSASGGSALPQVVDRFLTAIGIKVLEGYGMTETSALISLRDVQKPVSGTVGRP
FPGYKIKLKNDLGAEVPLAPGAKGTLWVHSNQLLLGYYKRPELNAVIFDKDGFFDTGDIM
VLTAAGDLMFAGRSKETIALAGGENIEPVPIEDKLLASEFIDQVMIVGDDRKTLGAIIVP
NFEKVRSHAGIKGIPESQWNDNAQVREIFKNEISQRISAKTGFKSFEQIPKNLFYLVPRQ
FEIGQELTRTYKLRRTVIKDMYKNEIDSMYS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagcccaaaacgttttatgacctgttcgcgtacgccgcagagcagaagcccgcg
cttgagactttcaaaattcgcaagaaaagcggcgtcattcagggccgcaccttcaaacgt
attcatgaactggtcaccgaactggctgcaggcctcaaaagcgcgggggtcgccgccgac
gaccgcgtcaccctgctctgcgacagctcacccaactggattcttgccgacgcagccatt
gttgcagcaggcgccgtctgcgtgccccgcggcaccgacgtcaccgacgacgacattctc
tacatcgtcggccacagcgaaagccgttgggcgattgtgcaaaaagcaaaagaccgcgac
aggctgctgaaatttcagaaagaactgcccgcgctcgaaaagatctgggtactcgaagac
gatgactctgaactcgcagcgggcgagagctcggcagaagagctgctcgcactcggcaaa
accgcattgcataaagacagcgcgcttgttatcaaactcaatgcttcggctgacccggcc
aagatggcgacgatcatctatacgagtggcacgacaggggcaccgaaaggcgtgatgctc
aaccagacgggctggctgaatgcgctggggcgcgccctcgaaatgaaggtgatcaccgaa
aaagataccgcgctgtcgctgctgccaccatggcatgcattcgaacgtgcggtcgaatat
ggcgtcatgatggcgcagtgcgaattcatgatctcgggcatcaacacgctccgccaggat
ctgggtgactttaagccgacaagctttccctcggtgccccgtatctgggaatcgctctac
aacggcattatgcagaagctcgaaaaagagtcgccggtgaagcgcaatgtcttctacttt
tttctcgatgtcggcgccgcatgggcaaaacacgaggcgatcttcaatggctatgacctt
caggttaagcctaagccagctctgcagcaggtactcgaccgggccgcatcgggcgcagtt
ctggctgcgctattgccgctaaagctggcctcgcaggcggttttcgcgccgattcatcag
gcactcggcggcaacgtcagcaaatcggcttccggtggttcggcactaccgcaggtggtc
gacaggttcttgacggcaattggcattaaggtgctcgaaggttatggcatgacggagact
tcggcgcttattagcctacgcgacgtgcaaaagcccgtgagcggcacagtgggccgtccg
tttccagggtacaaaattaagctcaagaacgacctcggcgctgaggtgccgctcgcgccg
ggcgcgaaaggtaccctgtgggtgcattctaaccagctgcttttggggtattacaaacgc
cctgaactcaatgctgtaatttttgataaagacggttttttcgacaccggtgacattatg
gttttgaccgcggcgggcgacctcatgttcgcaggtcgcagcaaagagaccattgcactc
gcgggtggtgaaaacatcgaacccgtgccgatcgaagacaagctgctcgcttcagaattc
atcgatcaggtaatgattgtgggtgatgaccgcaaaaccctaggcgcgatcatcgtgccg
aatttcgagaaagtgcgtagccatgccggcatcaagggcatacccgaatcgcagtggaat
gataatgcacaggtgcgagagatttttaagaatgaaatttcacagcgtatatcggctaaa
acgggtttcaagagttttgagcagatacctaaaaatctgttctatctggtgccgcgccaa
tttgaaatcgggcaagagctgacacgcacgtacaagctgcggcgcacggtaattaaagac
atgtacaagaacgagatcgattcgatgtacagttaa
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