Entry |
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Name |
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KO |
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Organism |
tpy Trueperella pyogenes TP6375
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:tpy00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CQ11_00750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:tpy03019]
CQ11_00750
03009 Ribosome biogenesis [BR:tpy03009]
CQ11_00750
Enzymes [BR:tpy01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CQ11_00750
Messenger RNA biogenesis [BR:tpy03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CQ11_00750
Ribosome biogenesis [BR:tpy03009]
Prokaryotic type
rRNA helicases
CQ11_00750
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
156012..157838
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AA seq |
608 aa
MTTFAGLNLPENILSAITQMGYENPTPIQEEAIPPLLEGRDVVGVAQTGTGKTAAFALPM
LTHVDADLHHVQALVLAPTRELAMQGAEAIDNFASNTTGLNVVAVYGGSSYVPQINALKD
GAQVVVGTPGRVMDLIDKGALKLQSVKYFVLDEADEMLRMGFAEDVEKIASGLPAQRVTA
LFSATMPATIRRVAQTHMSDPVEITVTPPASTIATIHQTFAVVPTRHKIGALARVLATTS
ADAALVFVRTRATAEDLAIELSTRGVHAATLSGDVQQRDREKLVDRLRHGTLDVLVATDV
AARGLDVERIGLVVNFDVPREVDTYVHRIGRTGRAGREGTSLTFVTPKERSRLRRIEQIT
GAAMEQVELPTPAEVSGLRARRLVAEAKERYEIGRLSVYREIIAEFRSEQIESDKPLSPE
DLIAALLAIGVRDPGPQPDEEPEHLTARFEGRDERGRRSHRERGERPDRGDRRRPAKPKT
FAGEGTMYRVEVGRKDGVSPGAIVGALTNEGGLNGSQLGRIDIYPTFSLVQISQEIDRDT
QRRIAKARVSGRDLRISKDTGPRQSDERAQRKYRADRKFGEDKRERKFEGRRHIRNHDSS
PRASRQSY |
NT seq |
1827 nt +upstreamnt +downstreamnt
atgactacttttgctgggcttaacctgcccgagaatatcctgtccgccattacccagatg
gggtacgagaaccccacccccattcaggaagaggcgattcccccgcttctcgagggccgc
gacgtcgtcggtgtcgcccagaccggtaccggaaagaccgccgcgttcgcactgccgatg
ctgacgcacgtggacgccgatcttcaccacgtccaggccctagttctcgccccgacccgc
gagctggcgatgcagggcgccgaagccatcgataacttcgcctccaacactactggcctg
aacgtcgtcgcggtttacggcggttcgtcctacgtgccgcagatcaacgcgctcaaggac
ggcgcacaggtggtggttggaacgccgggccgcgtcatggacctcatcgataagggcgcg
ctcaagctccaaagcgtgaagtacttcgtcctcgacgaggccgacgagatgctccgcatg
ggtttcgccgaggacgtcgagaagattgcctcgggactgccggctcagcgcgtcacggca
ctcttttcggccacgatgccggcgacgattcggcgggttgcgcagacccacatgagcgat
cctgtggagatcacagtcacgcccccggcctcgacgatcgccactatccatcagaccttt
gccgtggttcccacacgccacaagattggcgcgctcgcccgcgtgctggcgacgacctcc
gccgatgccgccctcgtcttcgtgcgcacgcgtgcaacagccgaggatctcgccatcgag
ctgagcacgcgcggcgttcacgcggcgacactctccggcgacgtccagcagcgcgaccgc
gagaagctggtcgaccggttgcgccacggcacgcttgacgtcctggtcgccaccgacgtc
gccgcccgcggcctcgacgtcgagcgcatcgggcttgtcgtcaattttgacgtcccgcgc
gaagtcgatacctacgttcatcgcattgggcgtaccggcagagccggacgcgaaggcacc
tcgctgacgttcgtcacccccaaggaacgcagccgccttcgccgcatcgagcagattacc
ggcgctgccatggagcaggttgagctgcccactcctgcggaggtctcgggcctacgtgct
cggcgcctcgtggccgaagccaaggagcgttacgagatcggccgcctgtctgtctaccgt
gaaatcattgccgagttccgcagcgagcagattgagtcagataagccgctctcccccgaa
gacctcatcgcagcgcttttggcaatcggcgtgcgggatccggggccacagcccgacgag
gagccagaacacttgaccgcccgcttcgaagggcgtgacgaacgcggacgccgttctcat
cgcgagcggggagagcgcccggaccgaggcgaccgcaggcggcctgctaagcccaagacc
ttcgcgggcgagggaacgatgtaccgcgttgaggtcggccgcaaggacggcgtttccccc
ggtgcgatcgtcggtgccctcacaaacgagggcggcctcaacggctcccagctcggccgg
atcgacatttatccgaccttctccctcgtgcagatcagccaggaaattgaccgcgatacc
cagcgccgcattgcgaaggctcgcgtttcgggccgagatctgcgaatttcgaaggacacc
ggcccgcgtcaatccgacgagcgcgctcagcgtaagtatcgcgccgatcgcaagttcggc
gaagacaagcgggagcggaagttcgagggccggcgtcatatacgcaaccacgactcttca
ccgcgcgcatcacgacagtcttattag |