Trueperella pyogenes TP6375: CQ11_00930
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Entry
CQ11_00930 CDS
T03070
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tpy
Trueperella pyogenes TP6375
Brite
KEGG Orthology (KO) [BR:
tpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpy03016
]
CQ11_00930
Enzymes [BR:
tpy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CQ11_00930
Transfer RNA biogenesis [BR:
tpy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CQ11_00930
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AHU88820
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All DBs
Position
195281..196489
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AA seq
402 aa
AA seq
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MTLSIPSRPLDIPRDGLPPVTHDDIDDAVARLAAGAGPLAVDTERANEMRYTNRAYLLQI
RREGVGTFLIDPVGIEDRLDGLREVMNCEWIVHAAHQDLLCLRELGLTPTTVFDTEIAAL
LLGYERVSLQALCEKVLGWSLAKEYSNSDWSQRPLPLPLLTYAALDVELLHELRTELTAQ
LLEAERFSWFVQECEEVRVRQPAPPRQQPWRRPARRAGIKDQRALAMMRELWNARDDLAR
RRDIAPHRILPNQILAELAKRKPRSRADVVNSSLFRSEARKRDVNTWWHAIEIAWRLDES
ALPERKFSEKKDPFPPTNEWPRKDPQAAQRWELLRPTVLGIAESLAIRQEVLLKPRTQKL
AAWKGWRTRDELLTLLAADGARPWQIELVGDRIQDAVAGQHL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
ttgaccctgtctattccctctcgtcccctcgatatacctcgcgacgggctgcccccagtc
actcatgacgatatcgacgacgccgtggcgcgcttagcggcaggagccggccctctcgcc
gtcgatactgagcgcgccaacgagatgcgctacacgaatcgcgcctacctcctccagatc
cgccgtgagggcgtaggaacattcctcatcgatccggtgggcatcgaggataggctcgac
gggctgcgtgaggtgatgaattgcgagtggattgtccacgcagctcaccaagatctcctg
tgtctgcgtgagctggggttaactcccacaaccgtgttcgacaccgagatcgccgcactg
ttgctgggctacgaacgagtctcgttgcaggcgctgtgcgagaaggtgctcggctggtcg
ctggcgaaagaatactcgaactctgactggtcgcagcgcccgcttccactaccgctgctg
acttacgccgcgctcgatgtggagttgcttcacgagttgcgtaccgagctcaccgcgcaa
ctcctggaggccgagcgtttttcttggttcgtccaagagtgcgaggaggtgcgtgtgcgc
cagcccgccccgccacgccagcagccgtggcgccgtcccgcgcgtcgagccggaatcaaa
gaccaacgcgcgcttgccatgatgcgcgagctgtggaacgcccgcgacgacctggccagg
cggcgcgacatcgcgccgcacaggatcttgcccaaccagattcttgcggaactggccaag
cgcaagccgcgctcgcgagccgacgtcgtcaattcttccctcttccgctccgaagcgcgc
aaaagggatgtcaacacgtggtggcatgccattgagatcgcctggcgtctggacgaatct
gcacttccagagcggaaatttagtgagaagaaagatccgttcccgcccaccaacgaatgg
ccgcgtaaggatcctcaggccgcccagcgctgggaactattgcgcccaactgtactgggc
attgctgaaagcctcgccatccgtcaagaagtcctgctcaagccgcgcacacaaaagtta
gcggcgtggaaaggctggcgcacacgcgacgagctcctcaccctccttgccgccgacggc
gcccgcccgtggcaaatcgagctcgtcggcgatcgtattcaggacgccgtggccggacag
cacctatag
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