KEGG   Trueperella pyogenes TP6375: CQ11_01785
Entry
CQ11_01785        CDS       T03070                                 
Name
(GenBank) ribonuclease
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
tpy  Trueperella pyogenes TP6375
Pathway
tpy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tpy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CQ11_01785
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpy03019]
    CQ11_01785
Messenger RNA biogenesis [BR:tpy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CQ11_01785
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: AHU88937
UniProt: A0ABV3N9Z0
LinkDB
Position
complement(368675..370351)
AA seq 558 aa
MTKTKLPPPIQNGALRIVPLGGIGEIGRNMTVFEIDGRMIIVDCGVLFPEESQPGVDLIL
PDFDYIEDRLHQIDGIILTHGHEDHIGGVPYLLRLREDIPIIGSQLTIALVEAKLAEHRI
RPYTLVVEEGDIENLGNFECEFIAVNHSIPDALAVFIRTNAGTVLHTGDFKMDQLPLDGR
ITDLRSFARVGEEGVDLFMCDSTNAEVPGFVPSEANIGPVIESVFAQARGKIVVASFASH
VHRVQQVLDAAYKYERKVCFVGRSMVRNMGIAEELGYLSVPEDTLVDLKNADSVPDDEIV
YMSTGSQGEPMAVLSRIASGAHKTISVGPNDTVIFASSLIPGNENSVFRLINGLTKLGAK
VVHQGNAKVHVSGHAAEGELLYCYNILEPEYAMPVHGEVRHLVANGAIAVKTGVPAENVL
LAEDGSVIDMVDGRCSIVGEVPCGYVYVDGSSVGEIGEAELTDRRTLGEEGFIAIFAVID
VQERKVLTGPHIQARGMAEDDSVFEEILPDVRTALDEAIASESANTYQMQQAMRRVVGRW
VARKLRRKPMIIPTVIEA
NT seq 1677 nt   +upstreamnt  +downstreamnt
gtgactaagacgaagcttcccccacccatccaaaacggcgccctacgtatcgttccgctc
ggcggaattggcgagattgggcgcaacatgaccgtcttcgaaattgacggccgcatgatc
atcgtcgactgcggcgtgctctttcccgaagaatcccagcccggcgtcgatctcatcctg
ccagactttgactacatcgaggaccgcctccaccagattgacggcatcatcctcacccac
gggcacgaggaccacatcggcggcgttccctacctgctgcggttgcgcgaagacatcccg
atcatcggttctcaactgaccatcgcactcgtcgaggccaagctggccgagcaccgtatc
cggccttacaccctggtggtcgaagaaggagacatcgaaaatctcggaaacttcgagtgc
gaattcatcgccgtcaaccactccatcccggacgcgctcgcggtcttcatccgcaccaac
gccggaaccgtcctgcacacgggcgatttcaagatggaccaacttcctctggacgggcgt
atcactgacctgcgctctttcgcccgcgtaggcgaagagggcgtggatctattcatgtgt
gactcgacaaatgctgaggtgcctggcttcgttccatcggaagcaaatatcggcccggtt
atcgaaagcgtcttcgcccaggcgcgtggcaagatcgtcgtcgcctcctttgcctcacac
gtccaccgcgtccagcaagtactcgacgccgcctacaagtacgagcgcaaagtgtgtttc
gtcgggcgctcaatggtacgcaacatggggatagccgaggagcttggctacctgtctgtt
cccgaggacacgctcgtggatctgaagaatgcggattcggtgccagacgacgagatcgtc
tacatgtccaccggctcccaaggcgagccgatggccgtgctctctcgcattgcttctggt
gcccacaagaccatttccgtagggcctaatgacacggtcattttcgcgtcctcgctcata
cccggtaacgaaaattcggtcttccgtctcatcaatggcctgacgaagctgggcgcgaag
gtggtccatcaaggcaacgcaaaggtacacgtctccggccacgcagccgaaggcgagcta
ctttactgctacaacatcctcgaacccgaatacgcgatgcccgtccacggcgaagtgcgc
cacctcgtcgccaacggggcaatcgcggtcaagacgggcgttccagccgagaacgtgctg
ctcgccgaggacggttcggtcatcgatatggtagacggtcgctgctcgatcgtcggcgag
gtgccgtgcggctacgtctatgtagacggatcatccgtcggtgagatcggtgaagcagag
ctgaccgatcgcagaaccctgggggaggagggctttatcgcgatcttcgccgtcattgac
gtccaggaacgcaaagtgctcaccgggccgcacattcaggcgcgcgggatggctgaagac
gattctgtcttcgaagagatcttgcccgatgtgcgcaccgccctcgacgaggcgatcgcg
agcgagtccgctaacacctatcagatgcagcaggcgatgcgccgcgtggtcgggcgttgg
gttgcgcgcaagctccgccgcaagccgatgatcatccccactgtcatcgaggcatga

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