Trueperella pyogenes TP6375: CQ11_01785
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Entry
CQ11_01785 CDS
T03070
Name
(GenBank) ribonuclease
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
tpy
Trueperella pyogenes TP6375
Pathway
tpy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CQ11_01785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpy03019
]
CQ11_01785
Messenger RNA biogenesis [BR:
tpy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CQ11_01785
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AHU88937
UniProt:
A0ABV3N9Z0
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Position
complement(368675..370351)
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AA seq
558 aa
AA seq
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MTKTKLPPPIQNGALRIVPLGGIGEIGRNMTVFEIDGRMIIVDCGVLFPEESQPGVDLIL
PDFDYIEDRLHQIDGIILTHGHEDHIGGVPYLLRLREDIPIIGSQLTIALVEAKLAEHRI
RPYTLVVEEGDIENLGNFECEFIAVNHSIPDALAVFIRTNAGTVLHTGDFKMDQLPLDGR
ITDLRSFARVGEEGVDLFMCDSTNAEVPGFVPSEANIGPVIESVFAQARGKIVVASFASH
VHRVQQVLDAAYKYERKVCFVGRSMVRNMGIAEELGYLSVPEDTLVDLKNADSVPDDEIV
YMSTGSQGEPMAVLSRIASGAHKTISVGPNDTVIFASSLIPGNENSVFRLINGLTKLGAK
VVHQGNAKVHVSGHAAEGELLYCYNILEPEYAMPVHGEVRHLVANGAIAVKTGVPAENVL
LAEDGSVIDMVDGRCSIVGEVPCGYVYVDGSSVGEIGEAELTDRRTLGEEGFIAIFAVID
VQERKVLTGPHIQARGMAEDDSVFEEILPDVRTALDEAIASESANTYQMQQAMRRVVGRW
VARKLRRKPMIIPTVIEA
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtgactaagacgaagcttcccccacccatccaaaacggcgccctacgtatcgttccgctc
ggcggaattggcgagattgggcgcaacatgaccgtcttcgaaattgacggccgcatgatc
atcgtcgactgcggcgtgctctttcccgaagaatcccagcccggcgtcgatctcatcctg
ccagactttgactacatcgaggaccgcctccaccagattgacggcatcatcctcacccac
gggcacgaggaccacatcggcggcgttccctacctgctgcggttgcgcgaagacatcccg
atcatcggttctcaactgaccatcgcactcgtcgaggccaagctggccgagcaccgtatc
cggccttacaccctggtggtcgaagaaggagacatcgaaaatctcggaaacttcgagtgc
gaattcatcgccgtcaaccactccatcccggacgcgctcgcggtcttcatccgcaccaac
gccggaaccgtcctgcacacgggcgatttcaagatggaccaacttcctctggacgggcgt
atcactgacctgcgctctttcgcccgcgtaggcgaagagggcgtggatctattcatgtgt
gactcgacaaatgctgaggtgcctggcttcgttccatcggaagcaaatatcggcccggtt
atcgaaagcgtcttcgcccaggcgcgtggcaagatcgtcgtcgcctcctttgcctcacac
gtccaccgcgtccagcaagtactcgacgccgcctacaagtacgagcgcaaagtgtgtttc
gtcgggcgctcaatggtacgcaacatggggatagccgaggagcttggctacctgtctgtt
cccgaggacacgctcgtggatctgaagaatgcggattcggtgccagacgacgagatcgtc
tacatgtccaccggctcccaaggcgagccgatggccgtgctctctcgcattgcttctggt
gcccacaagaccatttccgtagggcctaatgacacggtcattttcgcgtcctcgctcata
cccggtaacgaaaattcggtcttccgtctcatcaatggcctgacgaagctgggcgcgaag
gtggtccatcaaggcaacgcaaaggtacacgtctccggccacgcagccgaaggcgagcta
ctttactgctacaacatcctcgaacccgaatacgcgatgcccgtccacggcgaagtgcgc
cacctcgtcgccaacggggcaatcgcggtcaagacgggcgttccagccgagaacgtgctg
ctcgccgaggacggttcggtcatcgatatggtagacggtcgctgctcgatcgtcggcgag
gtgccgtgcggctacgtctatgtagacggatcatccgtcggtgagatcggtgaagcagag
ctgaccgatcgcagaaccctgggggaggagggctttatcgcgatcttcgccgtcattgac
gtccaggaacgcaaagtgctcaccgggccgcacattcaggcgcgcgggatggctgaagac
gattctgtcttcgaagagatcttgcccgatgtgcgcaccgccctcgacgaggcgatcgcg
agcgagtccgctaacacctatcagatgcagcaggcgatgcgccgcgtggtcgggcgttgg
gttgcgcgcaagctccgccgcaagccgatgatcatccccactgtcatcgaggcatga
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