Trueperella pyogenes TP6375: CQ11_04290
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Entry
CQ11_04290 CDS
T03070
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tpy
Trueperella pyogenes TP6375
Pathway
tpy03420
Nucleotide excision repair
tpy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CQ11_04290
03430 Mismatch repair
CQ11_04290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpy03400
]
CQ11_04290
Enzymes [BR:
tpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CQ11_04290
DNA repair and recombination proteins [BR:
tpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CQ11_04290
MMR (mismatch excision repair)
Other MMR factors
CQ11_04290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
ResIII
DEAD
AAA_16
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AHU89329
LinkDB
All DBs
Position
complement(903617..906223)
Genome browser
AA seq
868 aa
AA seq
DB search
MSDAYSHAMERLRARVAAAQEVNDARRAAAQGQVGADQGQAGPGQGAAGQGVSACGHAVR
SDSALEGLNAEQRRAVIHSGGHLLVVAGAGSGKTRVLTTRIYHLISSGSVRPSEILAITF
TNKAAKEMRERLESMIGPTAQRMWISTFHSACVRILRAEHEALGMRSTFTIYDSADSNRL
MTMVAREENIDIKQFPVKKLLRRVSDLKNDMVTASAFEMRNLNPEERVIAQAYSGYQRRL
KAANAVDFDDLIMLTVNLLKDNPLIAEHYRRRFRHILVDEYQDTNVAQYELIRVLVGGES
DEPHGELTVVGDADQSIYAFRGATIRNIQDFEQDFPNATSILLEQNYRSTQNILSAANAV
IANNLGRRPKRLWTDSGSGEKIVGYVADAESDEASFVVEEIDQLRDKGFAYGQVAVFYRT
NAQSRALEEMFVRSGIPYKVVGGTKFYERKEIKDAIAYLQAVANPDDTVSVRRILNEPRR
GLGAKAEETVAAHAARYGISFGAALTDVAHPDDAASAGRATVGLQARSANAITDFVVMLE
EIRAKAVAGAPPADILDEIMDRSGYLVSLQRSNDPQDEVRVENLAELHSVASDFSVVNEA
GTLGDFLDQVSLVADSDQIPDEDGGEGEVVLMTVHTAKGLEFPVVFVTGMEDGTFPHIRA
MNAPEELEEERRLAYVAFTRARQRLYITRAGSRSQWGAPQELPASRFLEEIPEDVIVWRR
DESSMQTLRNGSGWGGSRSSWGGARSGQTSSRYSQSWDDDDFAPAFGTAGATAANKGKFV
PSKFGAKSAPASGEADASKTRAEAHSASSAGEQTGGLAVGDKVRHKSFGVGRIIAFEGKG
RSTIAKVTFASGATKRLMLRFAPLEKMS
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcttattcacatgctatggaacgcctgcgcgcccgggttgcggctgcacag
gaagttaatgatgcccgccgggcggcggctcaagggcaggtcggcgctgaccagggtcag
gccggccccggtcagggggcggcggggcaaggtgtctccgcctgcggccacgcagtgcgt
tctgactcggcactcgaggggctcaacgccgagcagcgccgggcggtgatccattcgggt
gggcatctgctcgtcgtcgctggcgcgggctcgggcaagacgcgcgtactgaccacgcgc
atctatcacctcatctcctcgggctcagtgcgcccgtcggagatcctcgccatcacgttc
acgaacaaggcggcaaaggaaatgcgcgaacgcctggagtcgatgattggccctactgcg
cagcgcatgtggatctccaccttccattcggcctgcgtgcgcatcctgcgcgccgaacac
gaggccctcggcatgcgctccacgttcacgatctacgattcggccgactctaaccggttg
atgacgatggttgcgcgtgaggaaaacattgacatcaagcagttcccggtcaagaagttg
ctgcgccgagtctcggacttgaagaacgatatggtcacggcatccgcattcgagatgcgc
aaccttaacccggaagagcgcgtcatcgcccaggcttactccggctaccagcgccggttg
aaggccgccaacgcggtcgattttgatgacctcattatgctcacggtcaatctgctcaaa
gacaacccgctgattgccgagcactaccgccgccgcttccgccatatcctcgtagatgag
tatcaggacacgaacgttgcccagtatgagctcatccgcgtgctcgtggggggcgagagc
gacgagccgcacggcgagctgaccgtggtgggcgatgccgaccagtcgatctacgccttc
cgcggcgccacgatccgcaacattcaggacttcgagcaggactttccgaacgccacctcg
atcctgctcgaacagaactatcgctccacccagaacatcctctcggctgcgaacgccgtc
atcgccaacaacctcgggcgccggcccaagcggctgtggacggattcgggcagcggcgag
aagatcgtgggctatgtggccgacgccgagtcggacgaggcgtccttcgtcgtcgaggaa
attgaccagttgcgcgacaagggctttgcctatggtcaggtggccgtcttctaccgcacg
aacgcccagtcgcgtgcgctcgaggaaatgttcgtccgctccggcatcccctacaaggtc
gtcggcggaacgaagttttacgagcgcaaggaaatcaaggacgcgatcgcctacctccag
gccgtcgccaacccggacgacacggtctccgtccgccgcatcctcaacgagccgcgccgc
ggtctgggcgccaaggcggaggagaccgtcgcggcccacgccgcccgctacggtatctcc
ttcggcgccgcgctcaccgacgtcgcccatcctgacgacgccgccagcgcaggtcgcgcc
acagtaggcctgcaggcgcgctcggcgaatgcaatcaccgacttcgtggtcatgctcgaa
gagatccgcgccaaggccgtggcgggggcgcctccggccgacatcctcgacgagatcatg
gaccgctcgggatacctcgtgtccctgcagaggtcgaacgacccgcaagatgaggtgcgc
gtggagaacctcgccgagctgcattcggtggcctcggacttcagcgtggtcaacgaggca
ggcacgctcggcgacttcctcgaccaggtctcgctcgtggccgattcggatcagattcca
gacgaggacggcggcgagggcgaggtcgtcctcatgaccgtccacactgctaaaggcctc
gaattcccggtcgtgttcgtcaccggcatggaggacggcacgttcccgcacatccgcgcg
atgaacgcgcccgaggagctggaagaagagcgccggctcgcctacgtggctttcacacgt
gcccgccagcgcctctacatcacccgcgccggatcgcgctcgcagtggggggcgccccaa
gaattgccggcctcgcgtttcctcgaggagatacctgaggacgtgatcgtgtggcggcgt
gacgaatcttccatgcagaccctgcgcaacggctccggctggggaggttctcggtccagc
tggggtggcgcccgatctgggcagaccagctcgcgttactcgcagtcctgggacgacgac
gatttcgcacccgccttcggaaccgccggcgcgaccgcggccaacaaaggcaagttcgtc
ccgagcaagttcggggcgaaatccgcgcctgcctctggtgaggcggacgcgagcaagacg
cgggcggaagcgcacagtgcgtcgtcggcaggcgaacagactggtgggctggctgtgggg
gacaaggttcggcacaagtccttcggcgtagggcggattatcgctttcgaaggtaagggc
agatcaacgatcgctaaagtcactttcgcgtcaggggctacaaagcgccttatgttgcgc
ttcgcaccactggagaagatgtcatga
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