Trueperella pyogenes TP8: X956_02915
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Entry
X956_02915 CDS
T03579
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tpyo
Trueperella pyogenes TP8
Pathway
tpyo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpyo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
X956_02915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpyo03021
]
X956_02915
03400 DNA repair and recombination proteins [BR:
tpyo03400
]
X956_02915
Enzymes [BR:
tpyo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
X956_02915
Transcription machinery [BR:
tpyo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
X956_02915
DNA repair and recombination proteins [BR:
tpyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
X956_02915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF7172
Motif
Other DBs
NCBI-ProteinID:
AJC69184
LinkDB
All DBs
Position
631033..635007
Genome browser
AA seq
1324 aa
AA seq
DB search
MLDVNLFDQLSISLATSEDVRKWSHGTVTKPETINYRTLKPEKDGLFGEQIFGPTRDWEC
ACGKYKRPRYKGIVCERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDI
APKDLEKVIYFAAYMVTDVDEQRRHDDMPSLTAEYELERENLLKERDAAVEKALKAEEEI
LADAEASGEDAAARGKIKRSTQADTRRVRARYESDIANLEEIWDKFTKLKVGDLEGDELA
YREMETRWGDYFKAARGAEAIQRRLQTFDLEAERELLVDQIENGTAQRKTRALKRIKVVN
AFLHSKTSPEAMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLQRMLDL
NAPEIMVNNEKRMLQEAVDALFDNGRRGRPVQGAGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPTLKLHQCGLPKTMALELFKPFVQKRLVDLELAKNIKAAKRLIERQR
DEVFDVLEEVIQEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIRLHPLVCSAFNADFDGDQ
MAVHLPLSVEAQAEARILMLSANNILKPSDGRPVTVPAQDMIIGLYHLTTVRENEVGAGR
YFTSVAEAQMAHDLGEIHLNAPIHIRWKADEIVTPRGWVAPEGYEEGDDVVLKTTLGTAL
FNDALPTTFPFVNEPVGKKVLGNIVNELAERYPKVDAAASLDALKETGFYWGGRSGVTIA
VSDVIAPANKAQILEEAEQRAAKIEQDFQEGNIRDEDRRRDLVALWTEVTDLVADEMRKN
FDDLNNINQMVQSGARGNWMQIRQVAGMRGLVADPKGEIIPRPIKSNYREGLSALEYFTA
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREADCGTSRGLPKPIVAVDSAGNEIR
LATIDGIEREVTEKEVSAAEWAAASLIRSADIDTSVYARTLAKDALDADGNVVVAAGTDI
GDVALETLLNAGVKQIHVRSVLTCDSRVGTCAKCYGRSLATGKLVDIGEAVGIVAAQSIG
EPGTQLTMRTFHTGGAASAEDITQGLPRVQELFEARTPKGEAPIAEAAGRLEVEDLERSR
RLIIKRDDGDEDLTYLVGKRAKLLVPEGAHVSVGQQLVEGSVDPKKVLRISGRRVAQLHL
VSEVQNVYRSQGVEIHDKHIEVIVRQMLRRVTVLEAGTTTLLPGELVDVAQFEQANRAAM
AEGGKPASGRPELMGITKASLATDSWLSAASFQETTKVLTEAALNAKSDPLEGLKENVIL
GKLIPAGTGLEQLRRIKVGPTAEARSEYEQLNTFGGMDSFDDIYGYGSLDDYDTSMGYGY
GLNF
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaatctttttgatcagctttcgatctcgctagccacgtcggaggacgtg
cgcaagtggtcgcacggcactgtcaccaagccggaaactattaactaccgtacgctcaag
cccgaaaaggacggccttttcggtgagcagatcttcggccctacccgcgactgggaatgc
gcctgcggtaagtacaagcgtccccgttacaagggcatcgtctgtgagcgctgtggcgtt
gaggttacgcgttcgaaggtgcgccgcgagcgcatgggccacattgagctcgccgcgccc
gtcacccacatctggtacttcaagggcgtgccgtcgcgtctgggttacctgctcgacatc
gcgccgaaggacctggaaaaggtcatctacttcgcggcctacatggtcaccgacgtcgac
gagcagcgccgtcacgacgacatgccctcgctgactgctgagtacgaactcgagcgcgag
aacctcctcaaggagcgtgacgccgctgtggagaaggcactcaaggcggaagaggagatc
ctcgccgacgccgaagcctctggtgaggacgccgccgcccgtggcaagatcaagcgctcg
acgcaggccgatacgcgccgggtgcgtgcccgctacgagagcgatatcgctaacctggag
gagatctgggataagttcaccaagctcaaggtcggtgacctcgaaggcgacgagctcgct
taccgcgagatggagacccgttggggcgattacttcaaggctgcgcgcggtgctgaggct
attcagcgtcgcctgcagactttcgatctggaggctgagcgggagctgctcgttgaccag
atcgaaaacggcaccgcgcagcgcaagactcgcgcgctcaagcgtatcaaggtggtcaac
gccttcctgcactcgaagacctccccggaggcgatggttctggacgcaatcccggtcatc
ccgccggatctgcgtccgatggtacagctcgatggcggtcggttcgcgacctcggatctc
aacgatctctaccgccgcgtcatcaaccgcaacaaccgtctccagcgcatgctcgacttg
aacgcgccggaaatcatggtcaataacgaaaagcgcatgctgcaagaggctgtggacgcg
ctcttcgacaacggccgccgcggccgcccagttcagggcgcgggcaaccgtccactgaag
tcgatctccgacatgctcaagggcaagcaggggcgtttccgccagaacctcctcggtaag
cgcgtggattactctggccgttcggttatcgttgtcggcccgaccctcaagctgcaccag
tgcggtctgcccaagaccatggctctggagctgtttaagccgttcgtacagaagcgtctg
gtggacctcgagctggccaagaacatcaaggctgccaagcgcctgatcgagcggcagcgt
gacgaggtcttcgacgtgctcgaagaggtcatccaggagcacccggtgctgcttaaccgc
gcacctacgctgcaccgcctcggcattcaggccttcgagccgcagctgatcgaaggtaag
gcaatccgtcttcacccgctcgtgtgctccgcgttcaacgccgacttcgacggcgaccag
atggcagtccatctgccgctgtccgttgaggcacaagcagaggctcgcatcctgatgctc
tctgccaacaacatcctcaagccctccgacggccgcccggtcaccgtcccggcgcaggac
atgatcattggcctgtaccacttgaccaccgtgcgcgagaacgaggtcggcgcaggccgg
tacttcacgtctgttgccgaggcacagatggctcacgaccttggcgagattcacctcaac
gccccgattcacatccgctggaaggccgacgagatcgtcactccgcgtggctgggttgcc
cccgagggctacgaggaaggcgacgacgtcgtcctcaagaccaccctcggaactgccctg
ttcaatgacgctctgccgacgacgttccccttcgtcaacgagcctgttggcaagaaggtt
ctgggcaatatcgtcaacgagctcgccgagcgctatccgaaggtcgacgcggcggcgtcg
ttggatgcactcaaggagaccggcttctactggggcggacgctccggtgtgacgatcgcc
gtctctgacgttatcgctccagcgaacaaggcccagatcctggaagaggccgagcagcgc
gccgcgaagatcgagcaggacttccaggaaggcaacattcgcgacgaggatcgccgccgc
gacctggttgcgctgtggactgaggtcactgacctggtcgcagacgaaatgcgcaagaac
ttcgacgacctgaacaacattaaccagatggttcagtcgggcgctcgtggtaactggatg
cagattcgccaggttgccggcatgcgtggcttggtggcggacccgaagggcgagattatt
ccccgaccgattaagtccaactaccgcgaaggcctctccgccctcgaatacttcaccgca
acccacggtgcacgaaagggcttggctgacaccgctctgcgtaccgctgactccggttac
ctcacccgtcgtcttgtggacgtcgcgcaggacgtcattgtccgagaggcagattgtggc
acttcccgcggcttgcccaagccgatcgtcgccgtcgactctgcaggtaacgagattcgt
cttgccacgatcgatggcatcgagcgcgaggtcaccgagaaggaagtttcggccgcagaa
tgggccgccgcttcgctcattcgttccgccgacatcgacacctcggtttatgcccgcacc
ctagccaaggatgctctcgacgccgacggcaacgtcgtcgtcgcggcgggcactgacatc
ggagacgttgctctggaaaccctgctcaacgccggcgtcaagcagattcacgtccgttcg
gtgctgacctgtgactcgcgtgtgggcacctgcgctaagtgctacggccgttcactggcc
accggtaagctcgtcgacatcggtgaggcagtcggtattgtggccgctcagtcgatcggc
gagcccggcacccagctcacaatgcgtaccttccacaccggtggtgcggcgtccgctgag
gatatcacgcagggtcttccgcgtgttcaggagctctttgaggcacgcacgccgaagggc
gaggcgccgattgctgaggcggctggccggttggaggtcgaggacctcgagcgttcgcgt
cgtctgatcatcaagcgtgacgacggcgacgaagacctcacctacctggtgggtaagcgc
gcgaagttgctcgttcccgagggggcgcacgtctcggtcggacagcagctggtcgagggc
tcggtggatccgaagaaggtgctgcgcatctctggccgacgtgtggcacagctccacctc
gtctccgaggtacagaacgtctaccgctcgcagggcgtggagattcacgacaagcacatc
gaagttatcgttcgtcagatgctgcgtcgcgtcacggttctcgaggccggtacgaccacg
ctgctgccgggcgagctcgtggatgttgcccagttcgagcaggccaatcgcgcagccatg
gccgagggcggcaagcccgcttccggccgaccggagctgatgggtattaccaaggcctcg
ctcgcaaccgactcgtggctgtctgcagcctccttccaggagaccacaaaggtcctcacg
gaggccgcgttgaacgcgaagtccgatccgctcgaggggcttaaggagaacgtcattctc
ggtaagctcatcccagctggtaccggactcgagcagctgcgccgcatcaaggtcggcccg
actgcagaggcgcgttccgagtacgagcagcttaacacgttcggtggcatggattcgttc
gatgacatctacggttacggctcactcgacgattacgacacgtcgatgggctacggttat
ggcctgaacttctag
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