Trueperella pyogenes TP8: X956_03105
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Entry
X956_03105 CDS
T03579
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tpyo
Trueperella pyogenes TP8
Pathway
tpyo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpyo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
X956_03105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpyo03021
]
X956_03105
03400 DNA repair and recombination proteins [BR:
tpyo03400
]
X956_03105
Enzymes [BR:
tpyo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
X956_03105
Transcription machinery [BR:
tpyo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
X956_03105
DNA repair and recombination proteins [BR:
tpyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
X956_03105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AJC69219
LinkDB
All DBs
Position
665166..666164
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AA seq
332 aa
AA seq
DB search
MIIEQRPTLTEDKLSDTRSRFTLDPLEPGFGYTLGNSLRRTLLSSIPGAAITSVHIDGVL
HEFSTVPGCKEDVAEIILNLKELVVTSEHDEPVLMYLRKQGPGQVLASDITPPAGVEIHN
PDLVIATLNEKGKIEADLTVERGRGYVSAAQNNSPDYEIGRIPIDSIYSPVVKVSYKVEA
TRVGQRTDFDKLIVDVETKPSTAPRDAFASAGKTLVELFGLCTELNDEVEGLELKEAPVV
EQQSSDLQRPITILNLPARSQNCLQREGIHTIGELVLRSEADLLDIRNFGAKSIEDVKDE
LAKLDLRLKDSPAGFMSGFGDDAYGMQFSDDA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtgatcattgaacagcgacccacgctgacggaagataagctttccgatacacgttcgcgc
ttcacgctcgacccgctcgagcccggctttggctacacgctcggtaactccctgcgtcgt
acgctgctgtcctcaatccccggcgcggccatcacctcggtacacatcgacggcgtcctc
catgagttctcgactgttcccggttgcaaggaagacgttgccgagatcattttgaacctc
aaggagctcgttgtcacctctgagcatgatgagccggtgctcatgtatctgcgtaagcag
gggccgggccaggtcttggcttcggatattacgccgcctgccggcgtcgagatccacaat
ccagacctcgtgatcgccactctcaacgagaagggcaagattgaggccgatttgactgtt
gagcgtggccgtggctatgtctctgctgcgcagaacaactcgccggattacgagatcggt
cgcatcccgatcgattcgatctattcgccggtggtgaaggtttcgtacaaggttgaggcc
acccgtgtcggccagcgtaccgacttcgacaagctcattgttgacgtggaaaccaagccc
tctaccgccccgcgtgacgcattcgcctccgccggcaagaccctcgtagagctcttcggg
ctgtgcaccgaactcaacgacgaggtggaaggcctggagctgaaggaagcccccgttgtc
gagcagcagtcttcggacttgcagcgtcctatcacgatcctcaacctgcctgctcgttcg
cagaactgcctgcagcgggaaggcattcacacgatcggtgaactcgtattgcgttccgag
gccgacctcctcgacattcgcaacttcggcgcgaagtcgatcgaggacgtcaaggatgag
ctcgctaagctcgacctgcgcctgaaggattcgcccgcgggcttcatgtctggcttcggc
gacgacgcctacggcatgcagtttagcgacgacgcataa
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