Trueperella pyogenes TP8: X956_03500
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Entry
X956_03500 CDS
T03579
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tpyo
Trueperella pyogenes TP8
Pathway
tpyo03420
Nucleotide excision repair
tpyo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
X956_03500
03430 Mismatch repair
X956_03500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpyo03400
]
X956_03500
Enzymes [BR:
tpyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
X956_03500
DNA repair and recombination proteins [BR:
tpyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
X956_03500
MMR (mismatch excision repair)
Other MMR factors
X956_03500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
DEAD
ResIII
CarD_TRCF_RID
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AJC69280
LinkDB
All DBs
Position
736578..739184
Genome browser
AA seq
868 aa
AA seq
DB search
MSDAYSHAMERLRARVAAAQEVNDARRAAAQGQVGADQGQAGPGQGAAGQGVSACGHAVR
SDSALEGLNAEQRRAVIHSGGHLLVVAGAGSGKTRVLTTRIYHLISSDSVRPSEILAITF
TNKAAKEMRERLESMIGPTAQRMWISTFHSACVRILRAEHEARGMRSTFTIYDSADSNRL
MTMVAREENIDIKQFPVKKLLRRVSDLKNDMVTASAFEMRNLNPEERVIAQAYSGYQRRL
KAANAVDFDDLIMLTVNLLKDNPLIAEHYRRRFRHILVDEYQDTNVAQYELIRVLVGGEG
DEPHGELTVVGDADQSIYAFRGATIRNIQDFEQDFPNATSILLEQNYRSTQNILSAANAV
IANNLGRRPKRLWTDSGSGEKIVGYVADAESDEASFVVEEIDQLRDKGFAYGQVAVFYRT
NAQSRALEEMFVRSGIPYKVVGGTKFYERKEIKDAIAYLQAVANPDDTVSVRRILNEPRR
GLGAKAEETVAAHAARYGISFGAALIDVAHPDDAASAGRATVGLQARSANAITDFVVMLE
EIRAKAAAGAPPADILDEIMDRSGYLVSLQRSNDPQDEVRVENLAELHSVASDFSVVNEA
GTLGDFLDQVSLVADSDQIPDEDGGEGEVVLMTVHTAKGLEFPVVFVTGMEDGTFPHIRA
MNAPEELEEERRLAYVAFTRARQRLYITRAGSRSQWGAPQELPASRFLEEIPEDVILWRR
DESSMQTLRNGSGWGGSRSGWGGARSGQTSSRYSQSWDDDDFAPAFGTAGATAANKGKFV
PSKFGAKSAPASGEADASKTRAEAHSASSAGEQTGGLAVGDKVRHKSFGVGRIIAFEGKG
RSTIAKVTFASGTTKRLMLRFAPLEKMS
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcttattcacatgctatggaacgcctgcgcgcccgggttgcggctgcacag
gaagttaatgatgcccgccgggcagcggctcaagggcaggtcggcgctgaccagggtcag
gccggccccggtcagggggcggcggggcaaggtgtctccgcctgcggccacgcagtgcgt
tctgactcggcactcgaggggctcaacgccgagcagcgccgggcggtgatccattcgggt
gggcatctgctcgtcgtcgcgggcgcgggctcgggcaagacgcgcgtactgaccacgcgc
atctatcacctcatctcctcggactcagtgcgcccgtcggagatcctcgccatcacgttc
acgaataaggcggcaaaggagatgcgcgaacgcctggagtcgatgatcggccccactgcg
cagcgcatgtggatctccaccttccattcggcctgcgtgcgcatcctgcgcgccgaacac
gaggcccgcggcatgcgctccacgttcacgatctacgattcggccgactctaaccggttg
atgacgatggttgcgcgtgaggaaaacattgacatcaagcagttcccggtcaagaagttg
ctgcgccgagtctcggacttgaagaacgatatggtcacggcatccgcattcgagatgcgc
aaccttaatccggaagagcgcgtcatcgcccaggcttactccggctaccagcgccggttg
aaggccgccaacgcggtcgacttcgatgacctcatcatgctcacggtcaatctgctcaaa
gacaacccgctgattgccgagcactaccgccgccgcttccgccatatcctcgtagatgag
tatcaggacacgaacgttgcccagtacgagctcatccgcgtgctcgtggggggcgagggt
gacgagccgcacggcgagctgaccgtggtgggcgatgccgaccagtcgatctacgccttc
cgcggcgccacgatccgcaacattcaggacttcgagcaggactttccgaacgccacctcg
atcctgctcgaacagaactatcgctccacccagaacatcctctcggctgcgaacgccgtc
atcgccaacaacctcgggcgccggcccaagcggctgtggacggattcgggcagcggcgag
aagatcgtgggctatgtggccgacgccgagtcggacgaggcgtccttcgtcgtcgaggaa
attgaccagttgcgcgacaagggctttgcctatggtcaggtggccgtcttctaccgcacg
aacgcccagtcgcgtgcgctcgaggaaatgttcgtccgctccggcatcccctacaaggtc
gtcggcggaacgaagttttacgagcgcaaggaaatcaaggacgcgatcgcctacctccag
gccgtcgccaacccggacgacacggtctccgtccgccgcatccttaacgagccgcgccgc
ggtctgggcgccaaggcggaggagaccgtcgcggcccacgccgcccgctacggtatctcc
ttcggcgccgcgctcatcgacgtcgcccatcctgacgacgccgccagcgcaggtcgcgcc
acagtaggcctgcaggcgcgctcggcgaatgcaatcaccgacttcgtggtcatgctcgaa
gagatccgcgccaaggctgcggcgggggcgcccccggccgacatcctcgacgagatcatg
gaccgctcgggatacctcgtgtccctgcagaggtcgaacgacccgcaagatgaggtgcgc
gtggagaacctcgccgagcttcattcggtggcctcggacttcagcgtggtcaacgaggca
ggcacgctcggcgacttcctcgaccaggtctcgctcgtggccgattcggatcagattcca
gacgaggacggcggcgagggcgaggtcgtcctcatgaccgtccacactgctaaaggcctc
gaattcccggtcgtgttcgtcaccggcatggaggacggcacgttcccgcacatccgcgcg
atgaacgcgcccgaggagctggaagaagagcgccggctcgcctacgtggctttcacacgt
gcccgccagcgcctctacatcacccgcgccggatcgcgctcgcagtggggggcgccccaa
gaattgccggcctcgcgtttcctcgaggagatacctgaggacgtgatcttgtggcggcgt
gacgaatcttccatgcagaccctgcgcaacggctccggctggggaggttctcggtccggc
tggggtggcgcccgatctgggcagaccagctcgcgttactcgcagtcctgggacgacgac
gatttcgcacccgccttcggaaccgccggcgcgaccgcggccaacaaaggcaagttcgtc
ccgagcaagttcggggcgaaatccgcgcctgcctctggtgaggcggacgcgagcaagacg
cgggcggaagcgcacagtgcgtcgtcggcaggcgaacagactggtgggctggctgtggga
gacaaggttcggcacaagtccttcggcgtagggcggattatcgctttcgaaggtaagggc
agatcgacgatcgctaaagtcactttcgcgtcagggactacaaagcgccttatgttgcgc
ttcgcaccactggagaagatgtcatga
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