KEGG   Trueperella pyogenes TP8: X956_04215
Entry
X956_04215        CDS       T03579                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
tpyo  Trueperella pyogenes TP8
Brite
KEGG Orthology (KO) [BR:tpyo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpyo03032]
    X956_04215
   03036 Chromosome and associated proteins [BR:tpyo03036]
    X956_04215
   03400 DNA repair and recombination proteins [BR:tpyo03400]
    X956_04215
DNA replication proteins [BR:tpyo03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    X956_04215
Chromosome and associated proteins [BR:tpyo03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    X956_04215
DNA repair and recombination proteins [BR:tpyo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      X956_04215
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-DNA_bdg DUF2267
Other DBs
NCBI-ProteinID: AJC69379
LinkDB
Position
887713..887994
AA seq 93 aa
MSLNRTELIAKIAEESGLTKTDADKAISALQNVLVDALAAGEAVKITGLMSVERTERAAR
KGRNPRTGEEIEIPAGYGVKISAGSTLKKAVAK
NT seq 282 nt   +upstreamnt  +downstreamnt
atgtccctcaatcgcactgaacttatcgccaagatcgccgaagagtcgggtctgactaag
accgacgctgacaaggctatctccgccctgcagaacgtcctcgtcgatgcccttgccgct
ggagaggccgtcaagatcacgggtctgatgtcggtcgagcgcactgagcgtgccgcccgc
aagggccgcaacccgcgcactggcgaggagattgagatccccgctggctatggcgtgaag
atctctgctggctccaccctgaagaaggctgtggctaagtaa

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