Trueperella pyogenes TP8: X956_06155
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Entry
X956_06155 CDS
T03579
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tpyo
Trueperella pyogenes TP8
Brite
KEGG Orthology (KO) [BR:
tpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpyo03032
]
X956_06155
03400 DNA repair and recombination proteins [BR:
tpyo03400
]
X956_06155
Enzymes [BR:
tpyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
X956_06155
DNA replication proteins [BR:
tpyo03032
]
Prokaryotic type
DNA Topoisomerases
X956_06155
DNA repair and recombination proteins [BR:
tpyo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
X956_06155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AJC69682
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Position
1291757..1294138
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AA seq
793 aa
AA seq
DB search
MVDIDVSQEMRTSFLEYSYSVIYARALPDARDGLKPVQRRILFQMDRMGLRPDKGHVKSS
RVIGDVMGRLHPHGDAAIYDAMVRLSQPFTMRLPMVDGHGNFGSLDDGPAAPRYTEVRMA
PAALAMTASLDEDVVDMVPNYDNTYMQPEVLPAAIPNLLVNGSSGIAVGMATNMAPHNLG
EVIAGARFLLDNPDASLDELMRYIPGPDLPEGGKIVGLDGVRQAYETGRGTFRTRASAHI
ENISPRKKGIIFTELPYMVGPEKVIDKIKDGVQNKKLLGISGVQNLTDRKHGTRLVVEVK
NSFNPEAVLADLYKHTPLEDSFGINNVALVEGQPRTLGLKELLDVFLRHRLSVTRRRTAF
RLQKAKDRLHLVEGLLIAILDIDEVIAVIRSCDDSAIAKDRLMKVFDLTEIQAEFILELR
LRRLTKFSQIELETERGQLRREIDELTQIMNSDERLRALVSHELAQTAQQFSTPRRTVLL
ESDITTSTARVALKVEDDPCWVLLSGDGLIARVVTDTEPARTGPRTPHDAIMAKVKTTNL
SSVGVITSDGSVNRLNVVDIPAIPETETAPSLSGGAPLKEILLAGKDSSVVGLINLDEPP
VLVLATAQGKIKRVNPDYPDKGAIDVIKLADGDQVVGAQSGTDDDEIVLVTSNAQLLRFP
ASEVRPQGRSGQGIAGIRLAEGARVIALGVVPHNDMAAHAVVTIAGSSNSLPGTAPGSAK
VTPLDRYPGKGRGTGGVRTQRFLRGEDQLHMAWIGQLPARAISERGKPVNLPDVDERRDG
SGTQLSAVVVAIG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atcgttgatattgacgtgtcgcaggaaatgcgcacgtccttcctcgaatactcgtactcg
gtaatctatgcccgcgcgttgccggatgcccgcgatggcctcaagccagtccagcggcga
atcctgttccagatggatcgtatgggcttgcgcccggacaaggggcatgtgaagtcctcg
cgcgtcattggcgacgtcatgggccgcctccatccacacggtgacgccgccatctacgac
gcaatggtgcgcctctcccagcccttcaccatgcggctacctatggtcgatggccacggc
aacttcggctctctcgacgacggccctgcggcgccgcggtacaccgaggttcgcatggct
ccggctgcgctagctatgacggcgagtctcgacgaggacgtcgtcgatatggttcccaat
tacgacaacacctacatgcagccggaggtattacccgccgccatccctaacctgctcgtc
aatggctcctccggcatcgccgtcggcatggcgacgaacatggcaccccataacctggga
gaggtaattgccggggcacgttttctcctcgacaacccggatgccagccttgacgaactc
atgcgctatattcccggcccagacctgcccgaaggcggaaagatcgttgggctcgacggc
gtgcgccaggcctatgaaaccgggcgcggcacgtttcgcacgcgagcaagcgcacacatc
gaaaacatttccccgcgcaaaaagggcattatcttcacagagttgccctacatggtaggc
ccggaaaaggtcattgacaagatcaaagacggcgtccaaaataaaaagctccttggcatt
tccggagtccaaaatctgaccgaccgcaagcacggcacccgcctcgtcgtcgaggtgaag
aattccttcaacccggaagccgtcctcgccgatctgtacaaacacacccccttggaggat
tcattcgggatcaacaatgtggcgctcgtggagggccagccacgaaccctcgggctgaag
gaacttcttgacgtcttcctccgccaccgcctctcggtcaccaggcgccgtaccgcgttc
cgcctgcaaaaggctaaagatcgcctccacctggtagaaggcctcctcatcgccatcctc
gacatcgacgaggtcatcgccgtcatccgctcctgcgatgattccgccatcgccaaagat
cgcctcatgaaggtcttcgacctgaccgagatccaggccgaattcatcctcgagctgcgc
ttgcggcgcctgaccaaattctcccagatcgaactggaaaccgagcgaggccagctgcgc
cgcgagattgacgaactcacccagatcatgaactcggatgaacggctgcgcgccctcgtc
tcccacgagctagcccagaccgcgcagcaattttctacccctcgacgcaccgtcttgctg
gaatctgacatcacgacgtcgaccgcccgcgtagcgctcaaggtggaagacgacccttgc
tgggtactgctctctggcgacggcctcatcgcccgcgtcgtcaccgacaccgagccggcc
cgcaccggcccgcgcactccacacgacgccatcatggccaaggtcaaaaccacaaacctc
tcatcggtaggtgtcatcacatccgacggttcggtcaaccggctcaacgtcgtcgatatc
ccggcgatacccgagacagaaaccgcgcctagcctcagcggcggcgcacccctcaaagag
attctgttggccggaaaagattcctcggtcgtggggctcattaatcttgatgagccaccc
gttctggtgctcgccaccgcccagggcaagatcaagcgcgtcaaccccgactatccggat
aagggtgccatcgacgtcatcaaactggccgacggtgatcaggtagtcggcgcccaaagc
ggcacagacgacgacgaaatcgtcctcgtgacatccaacgcgcagctcttgcgcttcccc
gcatccgaggtacgcccgcaggggcgttctggccaaggcatcgcgggcatccgcctcgcc
gagggtgcgcgagtcatcgccctcggcgtcgtgccacacaacgacatggccgcccacgca
gtggtgactattgccggttcgtctaactcgctgcccggaaccgcgccaggttctgcaaag
gtgactccactcgaccgctatcccggcaaaggccgcggcaccgggggcgttcgcacacaa
cgcttcctgcgcggagaagaccagcttcacatggcctggatcgggcagttgcccgcacgc
gccatcagtgagcgcggcaagccggtgaatctacccgacgtcgacgaacggcgcgacgga
tctggaacgcaactatccgccgtcgtcgtagctatcggctag
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