Trueperella pyogenes TP8: X956_06235
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Entry
X956_06235 CDS
T03579
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tpyo
Trueperella pyogenes TP8
Pathway
tpyo03030
DNA replication
tpyo03430
Mismatch repair
tpyo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X956_06235
03430 Mismatch repair
X956_06235
03440 Homologous recombination
X956_06235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpyo03032
]
X956_06235
03400 DNA repair and recombination proteins [BR:
tpyo03400
]
X956_06235
Enzymes [BR:
tpyo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X956_06235
DNA replication proteins [BR:
tpyo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
X956_06235
DNA repair and recombination proteins [BR:
tpyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
X956_06235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AJC69692
LinkDB
All DBs
Position
1310738..1312498
Genome browser
AA seq
586 aa
AA seq
DB search
MTYTARPGQSLDLTPARAHREGAPISASVQLAFDELGPSLFDVTFVVVDLETTGGRPGLN
AITEVGALKVRGGDVMGEFSALVNPGVAIPAHITMLTGITNSMVAHAPGIADVMPRFLEF
VGDDPNTVFVAHNARFDLSHLKVACAELECPFPKHPVIDTVKLARKVFTRDETPNYKLAT
LARICGAEVQPTHRALDDARATVDLLHAILSRLGGIGVTHLEDLLSATDPVPATRRARAY
LADGLPRGPGVYRFIGPGEEVLYVGTSVNVYKRVRQYFTAAEKRTRMAEMVDLAKRVDAT
ATATKLEANVLELRLIDELDPPYNRRSRRTQQRPWLALTNEPFPRLKVARKISRSQMTSS
LGPFTSSKQAVLAAELLQDATGLRDCTQRLSPQNMASACHLHELNICDAPCVTGLPQSQQ
LSAVRDALTGQINSVAQWALARIRSLASEERFEQAGHIRDRLYALVSGAKNFEEFRSLVG
NPRIVAAKNSGRTWEVVVVDYGYLRSSATTRPGEDPETLGHWLDVINDPLPEPELAAAHV
SHDEVRILSQWLLDEDVRLIKVAAPELISRSLRGGYGIKLPASSRP
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgtatacagcacggcctggccaatccctggatctcactccggcgcgcgctcatcgg
gagggcgcgcccatctcggcgtcggtacaactcgcttttgacgagctcgggccatcgcta
tttgacgtgaccttcgtcgtcgtcgatttggaaactaccggtgggcgtccagggctaaat
gccatcacggaggttggggcgctcaaggtgcgtggtggcgatgtcatgggtgaattctcg
gcgctcgtcaatcccggcgttgccataccggctcacatcactatgctgacggggattacg
aattcgatggtggcacacgcccccggaatcgcagacgttatgccacgcttcctcgaattc
gtcggtgacgatccaaatacagtcttcgtggcacacaacgcccgcttcgacctctcccat
ctcaaggtggcctgtgcggagctggaatgtcccttccctaagcacccggtaatagacaca
gtcaagcttgcgcgcaaggtctttacacgcgacgagacgcccaactacaaactcgccacc
ctagcgcgcatatgcggcgccgaggtgcaacccacccaccgtgcgctcgacgatgcgcgt
gcgacggtcgacctattacacgccatcctttcgcggctaggcggaatcggggtcacgcac
ctggaagatctgctttccgcaacagatccggtgcccgccactcggcgtgctcgcgcttac
ctggccgatgggcttccgcgcggacctggcgtttaccgcttcatcgggccgggcgaagag
gtgttgtatgtggggacatcagtcaatgtctacaaacgagtgcggcaatacttcactgcg
gccgagaagcgtacgcgtatggcggagatggtcgacctcgctaagcgtgtggacgccacg
gccaccgccaccaagcttgaggccaatgtgctcgagctacggctcatcgacgagctcgat
ccgccttataaccgccgttcacggcgcacccaacagcgcccatggcttgcattgactaac
gagccttttccgcgtctgaaggtcgcgcgcaaaatcagccgcagccagatgacatcgtcg
ctcggtcccttcacgtcgtcgaagcaggcagtattggccgctgagctgcttcaggatgcc
acaggactgcgcgattgtacccagcgcctgtccccacagaacatggcgtcggcctgccac
ctgcacgaactcaacatttgcgatgcgccgtgcgtgaccgggctgccgcagagtcagcag
ctgagcgcagtgcgcgacgcgctgactggtcaaataaactccgtcgcccagtgggcgctg
gctaggatccgctccctggccagcgaagaacgattcgaacaggctggacacattcgagac
cggctctatgccctcgtttcaggcgcaaagaacttcgaagagtttcgcagcctcgtcggc
aacccgcgcattgtcgcggccaaaaacagtgggagaacttgggaggtcgtcgtcgttgac
tacggttacttgcgaagcagcgctaccacacgtcctggcgaggatccggaaacgctgggc
cattggctggatgtcatcaacgatccgctccccgagccagagctcgccgcagcgcacgtc
tcccatgacgaggtacggattctctcacaatggctcttggacgaggacgtgcggctcatt
aaagtcgccgctccagagctcattagccgttcgttgagaggtggttacgggatcaagcta
ccggcctcgtcccgtccttag
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