Trueperella pyogenes TP8: X956_06605
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Entry
X956_06605 CDS
T03579
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tpyo
Trueperella pyogenes TP8
Pathway
tpyo03030
DNA replication
tpyo03430
Mismatch repair
tpyo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X956_06605
03430 Mismatch repair
X956_06605
03440 Homologous recombination
X956_06605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpyo03032
]
X956_06605
03400 DNA repair and recombination proteins [BR:
tpyo03400
]
X956_06605
Enzymes [BR:
tpyo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X956_06605
DNA replication proteins [BR:
tpyo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
X956_06605
DNA repair and recombination proteins [BR:
tpyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
X956_06605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HHH_3
DUF655
Motif
Other DBs
NCBI-ProteinID:
AJC69744
LinkDB
All DBs
Position
complement(1387066..1390608)
Genome browser
AA seq
1180 aa
AA seq
DB search
MAKNFAHLHVHTDYSLLDGAAKINQLVNEVVALGQPAVAITDHGNLHGAYELYKAANKVG
IKPIIGLEAYMTPGTSRHDKTRVLWGTEAQRQDDVSARGTYTHMTLLAETNEGMHNLFRM
QSLASIEGTVGKYARIDRELLEKYHHGLIGTAGCPSGEIQTRLRLGQYDDALKAAGEFQD
IFGKENFYFEVMDHGLEIERRVKDELLTIARTIGAPLLATNDSHYVTQEQATVQDAMLAL
NSGSTLMDPDRFRFEGTGYYIRSTQDMWNTFGHLEGACENTLEIVERCNVHFETTSDGIN
YMPKFPVPSGENEKSWFVREVNAGLHRRYGDIIPDDVRERADYEMDVILQMDFPGYFLVV
SDYIRWARRHGIRVGPGRGSGAGSMVAYALEITQLDPIKHDLLFERFLNPERISMPDLDI
DFDDSRRDEVIEYVEEKYGKDKVSQVVTFGTIKAKQSLKDASRVLGYPYEMGDRLTKAMP
PSVMGNDIPVNELFNSSHPRYAEAGEIRELIQNDPDCKKVYDLACGLEGMTRQTGMHACA
VIMSSKPLTDVIPVMMRQQDGAILTQFEYPECEELGLIKMDFLGLSNLTVIEAALANIRV
NGKEAPDIDQIPLDDPKTYELLARGDTLGIFQLDGAGMRTLLKQMKMDTFADISAVSALY
RPGPMGANSHTNYALRKNGLQEKTPIHPELEEDLEEILGATHGLIVFQEQVMRIAQKLAG
FTLGQADILRKAMGKKKADVLQQQFASFSQGMLNNGYSQESIDTLWNILLPFSSYAFNKS
HSEAYALVSYQTAYLKAHFPAEFMAALLTSKMSDKTKVATYLAECRRMKINVLVPDVNSS
LADYTAVGDEIRVGLRAVRNVGTNVVDGIIKAREEKGQFSSFQDFLDKIPLSACNKRSID
CLIKAGGFDSLGECRRALVGIAEEAIDSVTPVKRNEAAGQFDLFGDLGSDTGGGFDVVVP
DIPEWDKRDKLNYEREMLGLYVSDHPLSGMENFLNRAADINIVDLLEDGSVRDGQVVTIA
GIISSIQTKITKKSGKAWAIATIEDRTGPIDVNFFPNTYQQVSSMLIPDSVVIVEATVRV
EDEGPVKLFAKSMTLPPVGEIEIDYPIKLLVDERVCNDQNLNRLAEILQRYPGQSPVRLH
VKCAAKDATVVVELANEYWVAPEPSLYTDLKVLLGRDCVL
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaattttgctcaccttcatgtccatactgattattcgctgctcgatggggcg
gcgaagattaaccagctggtcaatgaagttgtggctcttgggcaacccgccgttgcgatt
accgatcacggcaatctgcacggcgcctacgaattatacaaggctgcaaataaggtgggc
atcaagccgattattggcctggaagcgtacatgacgccgggcacgtcgcgccatgacaag
acgcgcgtgctgtgggggacggaagctcaacggcaagacgacgtctcggcgcgcggcacc
tatacgcacatgaccctcctagctgagacgaacgagggcatgcacaacctgttccgcatg
cagtcactggcttcaattgaggggacggtgggcaagtacgcgcgtatcgatcgcgaactg
ctggaaaaataccatcatgggctgatcggcacggcagggtgcccatcgggggaaattcag
acgaggcttcgcctcggccaatacgatgacgcgttgaaagccgcaggcgagttccaagat
atcttcggtaaagagaacttctattttgaggtcatggatcatggcctggagatcgaacgc
cgagttaaggatgaattgctgacgatcgcgcgcacgatcggcgcgcctttgctggccacg
aacgattcgcactacgtcactcaggaacaggccacggtccaagatgccatgctcgccttg
aactccggtagtaccctcatggatcccgatcgattccgatttgaaggaacaggatattac
attcgcagcacgcaggacatgtggaacaccttcggccacttggagggggcgtgcgaaaat
accctcgagattgtggagcggtgcaatgtgcacttcgagacgacgagcgatggcatcaac
tacatgcccaagttcccggtgccgagcggtgaaaacgagaagtcgtggtttgtccgcgag
gtcaatgcgggattgcaccggcgttacggggatatcatcccggatgacgtgcgcgagcgc
gcagattacgagatggacgtcatcctacaaatggattttcccggctactttctggtggtt
tcggactacattcgctgggcgcgccgccatggcattcgggtaggtcccggccgtggttcc
ggcgcggggtcgatggtggcttacgcgctggagatcacgcaactagatccgattaagcac
gatctcctcttcgagcgattcttaaacccagaacgcatatccatgccggatcttgacatc
gatttcgacgatagccgccgcgatgaagtgatcgaatatgtggaggagaaatacggcaag
gataaggtttcgcaggtagtcacgttcggcacgattaaggccaaacagtcgctgaaggat
gcttcacgcgtgctcggctacccgtatgagatgggcgatcggctcaccaaagcaatgccg
ccgtcggtgatgggcaatgacatcccggtcaacgagctgtttaattcttcccacccgcgc
tatgcggaggccggcgagatccgtgaactgatccagaacgaccccgattgtaagaaggtc
tatgacttggcgtgcggtctggaggggatgacccgccagaccggcatgcatgcctgtgct
gtcatcatgtcctcaaagccgctcacggatgttatccctgtgatgatgcgccaacaggac
ggcgcgattctcacccagttcgaatatcccgagtgtgaggaactgggcctgatcaagatg
gatttccttgggctgtccaacctcaccgtcatcgaagcggcattggctaatattcgggtc
aacggcaaggaagccccggatatcgatcaaattccgcttgacgatccgaagacgtacgag
ctccttgcacgcggcgatacgctcggtattttccagctcgatggcgccggcatgcgcacc
ctgctcaagcagatgaaaatggataccttcgccgatatctccgccgtttctgccctttac
cggcccggaccgatgggtgcaaattcccatacgaactatgcccttcgcaagaatggcctc
caggaaaaaactccaatccatccagagctcgaagaggacttggaagagattcttggcgcc
acacacggcttgatcgtcttccaagagcaagttatgcgtatcgcccaaaagctcgctggc
ttcactttgggtcaagcagatattctccgcaaggcgatgggcaagaaaaaggccgatgta
ctgcaacaacagttcgccagcttctcccaaggaatgctcaataacggatattcccaggag
tcgattgataccctgtggaacatcctcttgccattttcttcctatgccttcaacaagtcc
cattcggaggcctatgcgctggtgtcctaccagacggcctatctcaaggcgcactttccg
gctgagttcatggccgcgctactgacgtcaaagatgtcggataagacgaaggtggcaacc
tatcttgccgaatgccgccgcatgaaaatcaacgtccttgtccctgacgtcaatagctca
ctcgctgattacactgctgtcggagacgagatccgcgtcggattacgggcagtgcgaaac
gtgggaacgaacgtcgtcgatggcatcatcaaggctcgcgaggagaaaggccagttctct
tccttccaagatttcctcgataagatcccgctatcggcgtgcaacaagcgttcgattgat
tgcctgattaaagcaggcggctttgactcactgggggagtgccgccgtgcgctcgtgggc
attgctgaggaggcaatcgactcggtcacccctgtcaagcgcaatgaggccgccggccag
tttgacctctttggcgatttgggcagtgataccggcggtggattcgacgtcgtcgtgccg
gacattccggagtgggataagcgagacaagctcaattatgaacgcgagatgctcggcctg
tatgtctccgaccacccgctgtcgggtatggaaaatttcctcaaccgtgctgctgatatt
aatatcgtcgatctccttgaagatggcagcgttcgtgacggacaggtagtgacaatcgct
ggaattatttcgagcattcagaccaagatcacgaagaaatcgggtaaggcgtgggcgatc
gctacgattgaggatcgtaccggaccaattgacgtcaatttcttcccgaatacttaccag
caggtttcgtcgatgctcatcccggactcggtggtcatcgtcgaggctaccgtgcgggtc
gaagatgaaggtccggtcaagctcttcgctaaatccatgacgctgccgccagttggtgag
atcgaaattgactatccgatcaagctcctggtcgatgagcgcgtgtgcaacgaccagaat
ctcaaccggctcgcggaaatcctccaacgatatcctggccagtctccggtgcgtctccac
gtcaaatgtgcggccaaagacgcaacggtggtggttgagctcgctaacgagtattgggtg
gccccagagccgtctctgtacacggatctgaaggtcttactcggccgtgactgcgtgctc
taa
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