Thermacetogenium phaeum: Tph_c08890
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Entry
Tph_c08890 CDS
T02276
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tpz
Thermacetogenium phaeum
Pathway
tpz03420
Nucleotide excision repair
tpz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tph_c08890 (pcrA)
03430 Mismatch repair
Tph_c08890 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpz03400
]
Tph_c08890 (pcrA)
Enzymes [BR:
tpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tph_c08890 (pcrA)
DNA repair and recombination proteins [BR:
tpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tph_c08890 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Tph_c08890 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
ResIII
DEAD
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AFV11119
UniProt:
K4LSS6
LinkDB
All DBs
Position
920949..923165
Genome browser
AA seq
738 aa
AA seq
DB search
MDLHKELNPAQLEAVLHEGGPMIIFAGAGSGKTRVLTYRIAHLVQRGVSPFRVLAVTFTN
RAAAEMRERVRQLVGSAARDIWISTFHSLAVRILRQEARFLSYDRDFVIFDEADQLTLIK
HCLQELSVDDRKFRPRGVLAEIGSLKNELITPDDYRQMTRNPREETIARLYARYQEKLLQ
QNALDFDDLLMQTVELFRREPCVLEHYQRRFQHILVDEYQDTNRAQYVLVRQLAGGHRNL
CVVGDDDQSIYRWRGADIRNILEFEKDYPEARVFKLEQNYRSTQRILAVANAVIANNRGR
KPKELWTSNGIGDPVYYYQAFDERDEAQFVTATIRELVKREEAGFGDCAVFYRTNAQSRS
FEEEFIRCNIPYRIYGGVRFYERKEIKDILAYLRLIANPADEVSLRRIINVPRRGIGETV
LARAEEVALREGKSLAVVLAEPERIPGLGGRAVKAVREFFRMVDGWRRLEGSLPIAELVE
RVLDETGYISLLEAEKTVEAETRLENLKEFLGVARQYDAGLDKSLAGFLEELALVADIDN
YRPEEQAVVLMTIHSAKGMEFPVVFLTGMEEGLFPHARALAEEAEIEEERRLCYVGITRA
QRRLYLSWATKRYLHGNGTFREPSRFLEEIPPEFLHPVVPGEGDAAAGPERSGAESGQGI
GDIGALNEASAGTEEVAIAAVESEVTYRVGDKVEHKKFGRGVVMETRIGPGGDLEIFVSF
ESAGFKHLMAKYAPLKKV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggatcttcacaaggaattgaatccggcgcagctggaggcggtgctgcacgaagggggt
ccgatgatcattttcgccggggcgggaagcggcaagacgcgggttttgacctaccgcatc
gcccacctggtgcagaggggggtgtcccccttccgggtcctggcggtgacctttaccaac
cgcgccgccgcggaaatgcgggagagggtacggcagctggtgggcagcgccgcccgggac
atctggatcagcaccttccattctctggcagtaaggatcctccggcaggaggcgcgcttt
ctgtcctatgaccgcgatttcgttattttcgacgaagccgatcagttgacgctgatcaag
cactgccttcaggagttgagcgtcgacgacaggaaattccgcccgcgcggcgtcctggcg
gagatcggtagcctgaaaaatgaactgattacacccgatgattacaggcagatgacgcgc
aatccgcgggaggagaccattgcccggctctatgcccgttaccaggagaagcttctccag
cagaacgccctggattttgacgacctcttgatgcagacggtggagcttttccggagggag
ccttgtgtgctggagcactaccagcgccgttttcagcatattctggtggacgagtaccag
gataccaatcgcgcccagtacgtcctggtgcggcagctggccggggggcaccggaacctc
tgcgtggttggggacgacgatcaatccatttaccgctggcgaggagcggatatcaggaat
atactggaattcgagaaggactatccagaggcccgggtattcaagctggagcagaactac
cggtctacccagcgcatcctggcggtagccaatgccgtgatcgccaacaaccgggggcga
aagcccaaggagctgtggacttccaacggaatcggggatcctgtctattattatcaggct
tttgatgagcgggatgaggcgcagttcgtgaccgccaccatccgggaactggtaaagcgg
gaggaagccggctttggggactgcgccgtattctacaggaccaatgcccagtcccgctcc
tttgaggaggagttcatccgctgcaacatcccctaccgcatttacggcggggtgcgcttc
tatgaacgcaaagagatcaaggatatcctcgcctatctgcgactgatcgccaaccccgcc
gatgaggtgtccctgcggcggatcatcaatgtgccgcgccgggggatcggtgaaacggtc
ctcgcccgggctgaagaggtcgccctcagggagggtaagagcctggccgtcgttctggcg
gagccggagcggattccggggctgggaggtcgtgccgtgaaggcagtccgggaattcttc
cgcatggtggacggctggcggcggctggagggatcgctgcccatagcggaacttgtggag
cgggttctcgacgaaaccggctacatctccctcctggaggccgaaaagaccgtagaggcg
gagacgcgcctggagaacctcaaagagttcctgggcgtggcccggcagtacgacgccgga
cttgataaatctctcgccggtttcctggaggagcttgccctggtggcggatatcgacaat
taccggccggaggagcaggcagtggttctgatgaccattcacagcgccaaggggatggag
tttcccgtcgtcttcctcaccggaatggaggaggggctgtttcctcacgcccgcgctctg
gccgaagaggcggagatagaggaggagcgccgcctttgctacgtgggtatcaccagggcg
caacgcaggctttatctatcctgggccaccaagcgctacctgcatggcaacggcaccttc
cgggagccttcccgcttcctcgaagagataccgccggagttcctgcatccagtggtgccc
ggggagggggatgctgctgccgggcctgagcggtcgggtgccgagagtggacagggaatt
ggagacattggtgctcttaatgaggcctccgccggcaccgaggaggttgccatagcggcc
gtggaatcagaggttacctaccgggtgggggataaggtggaacacaagaaattcgggcgg
ggggtagtcatggagaccagaatcggccccgggggtgacctggagatctttgtgtccttt
gaatccgccggttttaaacacctgatggcgaagtatgctcctctcaagaaggtttga
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