Thermacetogenium phaeum: Tph_c10720
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Entry
Tph_c10720 CDS
T02276
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tpz
Thermacetogenium phaeum
Brite
KEGG Orthology (KO) [BR:
tpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpz03032
]
Tph_c10720 (topA)
03400 DNA repair and recombination proteins [BR:
tpz03400
]
Tph_c10720 (topA)
Enzymes [BR:
tpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Tph_c10720 (topA)
DNA replication proteins [BR:
tpz03032
]
Prokaryotic type
DNA Topoisomerases
Tph_c10720 (topA)
DNA repair and recombination proteins [BR:
tpz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Tph_c10720 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF5817
Zn_Ribbon_TF
Clostridium_P47
Zn_ribbon_recom
Zn_ribbon_PaaD
Zn_ribbon_IS1595
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AFV11294
UniProt:
K4LTE0
LinkDB
All DBs
Position
1094569..1096647
Genome browser
AA seq
692 aa
AA seq
DB search
MAKVLVIVESPAKARAITKFLGRKYAVKASLGHVRDLPKSQLGVDVENGYQPKYITIRGK
GDVIKELRGAAKKAETVLLGPDPDREGEAIAWHLMEILGLPPETPCRIEFHEITKSALEK
AVKEPRLIDKARVDAQQCRRVLDRLVGYKLSPLLWRKIKRGLSAGRVQSVAVRLICDREK
EIADFQPEEYWTITGHFRTEESTIEANLIRRGKEKVSLPTVEDVNRVLAELEGASFVVSK
IEKKERKRNPSPPFTTSTLQQEASRKLNFPVKKTMLVAQQLYEGLDLGSEGIVGLITYMR
TDSTRIAETASDAARAYIAMKIGQEYLPEKAPVYKGKGRSQDAHEAIRPTDIYREPDQIK
NYLTRDQYRLYKLIWERFLASQMKPAVIEVTTVEIEGKEYIFRTSGSVVRFPGYLRVSAD
ADEVDSLLPELEEGERLELVKLEPKQHFTQPPSRYTEATLVKALEENGIGRPSTYAPIIA
TIQSRGYVVKEDKQLRPTELGQIVVDLLKEYFPKIIDVEFTAQMEEKLDQVEEGVYSWQE
VVDDFYLPFQEDLLQAEREIAVIPIEEECSEEKCPKCGRNLKIKQGRYGKFLACPGFPEC
RYTKQFYEDAGVSCPRCGGRIVIRRSRRGRKFYGCINYPECDFTCWDEPAAKNCPECGCF
LVYRGSGKKKLVCPDCGQTYQEEQLTEAEGVK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtactcgttattgtagaatcaccggcaaaggcgcgcgccatcaccaaattc
ttagggcgaaagtatgctgtcaaggcgtcgctggggcatgtgcgcgatctccccaaaagc
cagctcggcgtagacgtggagaacggatatcagccaaaatacattacgatccgtggaaaa
ggagatgttatcaaggaactgcgcggggcggcaaagaaagcggaaaccgtcttgctgggt
ccggacccggaccgcgagggggaggccatcgcctggcatctgatggaaatacttgggttg
cctccggaaaccccctgccgaatcgagtttcacgaaataaccaaaagtgctctggaaaag
gcagtcaaggagccgcgcctcatcgacaaggcgcgggttgatgcccaacagtgcaggcgg
gtgcttgatcggctggtgggctacaagctgagccctttactctggaggaagatcaagcgg
ggattgagcgcggggcgggtgcagtcggtggctgtgcgcctgatctgcgaccgggaaaag
gagattgccgattttcagccggaggaatattggacaattaccggccacttccgtaccgaa
gagagcaccatcgaggctaatctgatccgcagggggaaggaaaaggtctccctgcctacc
gttgaggatgttaacagggtgcttgccgaactggaaggcgccagctttgtcgtgagtaag
atcgagaagaaggaacgcaagcgcaacccttctccccccttcaccacaagcaccctgcag
caggaggcgagcaggaagctgaattttccggtcaagaagacgatgctcgtcgctcagcag
ctgtatgagggattggatctgggcagcgaagggatagtaggtttgatcacctatatgcga
acggattctacaaggattgcggagacggccagtgacgctgcccgggcctacattgctatg
aaaatcgggcaggaataccttccggagaaagctccggtctataaggggaaggggcgctct
caagatgcccatgaggccatccgccccacagacatctaccgagagccggatcagattaag
aattatttgacgcgcgaccagtacagattatacaaactgatctgggagcgcttcctggcg
agccagatgaaaccggccgtcattgaagtaacaaccgtggagattgaggggaaggagtac
atttttcggaccagcggctcggtggtgcgctttccgggatatttgcgggtctcagctgat
gcagacgaggtggactctctccttcctgaactggaggagggggagcgtttggaacttgtt
aaactggaaccaaagcagcactttacacagccaccatcgcgctatactgaggctactttg
gtgaaagccctcgaggagaatggtatcggcaggccgagcacatatgctcccattatcgcc
accattcaaagccgcgggtatgtggtcaaggaggataaacagctccgcccgacggaactg
ggacagatcgtggtcgaccttctgaaggaatattttcccaaaataatagatgtggaattt
actgctcagatggaagaaaaactggaccaggtggaggaaggtgtatactcctggcaggaa
gtagtggatgatttttaccttcctttccaggaagacctcctccaggcggaaagagaaata
gcggtgatcccgatagaagaggagtgcagcgaggaaaagtgtccgaagtgcggccggaac
ctcaagataaaacagggaaggtacggaaagttcctggcttgcccgggcttccccgagtgc
cggtacaccaaacagttttatgaggatgccggagtgtcctgcccgcgctgcggcggaaga
attgttatacgaaggtcgcggcgagggaggaaattttacggctgcatcaattaccccgaa
tgtgattttacctgctgggatgagcccgcagccaaaaactgcccggagtgcggctgtttt
ctggtttatcgtggcagtgggaaaaagaagctggtttgcccggattgcgggcagacctat
caggaagaacaattgacggaagcggagggggtaaaataa
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