Thermacetogenium phaeum: Tph_c13440
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Entry
Tph_c13440 CDS
T02276
Symbol
mutS1
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
tpz
Thermacetogenium phaeum
Pathway
tpz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Tph_c13440 (mutS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpz03400
]
Tph_c13440 (mutS1)
DNA repair and recombination proteins [BR:
tpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Tph_c13440 (mutS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
WIT1_2_N
FOXP-CC
Exonuc_VII_L
eIF-4B
DUF6364
Motif
Other DBs
NCBI-ProteinID:
AFV11560
UniProt:
K4LHW9
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Position
1364725..1367106
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AA seq
793 aa
AA seq
DB search
MDRFSLKKLEFHKIKEMLEGCCSTPLGVPYVRELEPATEVEEILARQAETTEACHAWRLC
PELSFDGVADLAPLLRRALIGGVLEPQDLLSCRDTLQAGERLKKALLSAGRELPRLQARA
RRIQECRTLQEKINLCIQPDGEISDSASPELARLRQQIRTLQVRIRGLLDEILSKPEWNR
YLQEPIYTVRGDRYVVPVKQEHRSQFPGLVHDLSGSGATVFMEPLPLVGPMNELMAKRTA
AHREEQRILEELTKMVAAFHDAIQENLRILGELDFILAKGHLSSKLKGNPPRFGDGRCLV
LKSGRHPLLRGKVVPLDLHLGRDFDCLIITGPNTGGKTVALKTVGLLVVMAQAGLHIPAG
ERTVLPVLQNVFADIGDEQSIEQSLSTFSGHMKNIVRILDQVGEGSLVLLDELGAGTDPE
QGAALGMAILDRLINKGALIIATTHFSELKIFAHTRQRAENASVEFDSRTLQPTYRLSIG
VPGESNAFEIAARLGLDSEVVERARSFLRPEQRELSDLIKHLKEDQFAASSARAEAELER
AEVEKLKEKLRREEERLRNKQQEILSMAHEEARELVRTARREAEQLIRFLREKMRQEDAR
IALEEAQAVRQKLGDLSGRIEERAAATEESAFAGDIPDTLKPGDVVAIPRFHQEGYVISP
PGPDGEVLVQVGALKLHLPIKELRRSLKRDKQKKELTATGSRSGGRTIKEHAQVSPEFDF
RGMRVEESLKEIDKYLDAAYLAGINRVSLIHGKGTGALREAVRQYLSKHPFVASYRNGNY
YEGGTGVTIVELK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggatagattttcattgaagaagctggagtttcacaagatcaaagagatgctggaagga
tgctgcagcactcctctgggtgttccctatgtgcgggaactggagccggcgacggaagtc
gaggagatcctcgctcgccaggcggaaactaccgaggcctgccatgcctggaggctctgc
cccgaactgtcctttgatggggtcgccgacctggcaccactgctgcggcgcgccctcatc
ggaggggtgctggagcctcaagatttgctgagctgccgcgataccctgcaggcaggagag
cggttgaagaaggccctcctgagcgccggcagggaactgccgcgcctgcaggcgagagcc
cgcaggatccaggagtgccggacactgcaggagaagatcaacctctgcatacagccggac
ggagaaatatccgacagcgcctcaccggaactggccagactgcggcagcagatccgaaca
ctgcaggttcggattcgcggcttgctggatgagatcctgtctaaaccggagtggaacaga
tatctgcaggagcccatttacactgtgcgaggggaccgttatgtagttcccgtcaagcag
gaacaccgcagccagttccccggcctcgttcacgatttgtccggaagtggagcgaccgtt
ttcatggagcccctgccgctggtgggcccgatgaatgaactgatggcaaagcgcaccgcc
gctcaccgggaagagcagcgcatcctggaggaactgaccaagatggtggcggcttttcac
gacgcaattcaggagaatctgaggatcctcggtgaactggattttattctggcaaagggg
catctcagcagtaaactcaaagggaaccctccccgcttcggcgatgggagatgtttagtg
ctgaagtcggggcgccacccgctcctcagagggaaggtggttcccctggatctccacctg
ggaagagattttgactgcctgatcattacggggccgaataccggaggaaaaacggtcgct
ttgaaaacagtcggcctgctggtggtaatggctcaggccgggctccatattcctgccggg
gagaggactgtgcttcccgttctccagaatgtttttgccgatatcggggatgagcagagc
attgaacaatcattgagcaccttctccggccatatgaaaaatattgtgcgcatcctggat
caggtcggggagggaagcctggtgctcctggatgaattgggggcgggcaccgatcccgag
cagggagccgctttggggatggcaatactggataggctgatcaacaaaggcgctctgatc
atcgctactacccatttcagcgagctgaaaatctttgcccataccaggcagcgggcggaa
aatgcttctgtggagttcgacagcaggaccctccagcccacctaccgcctttccatcggt
gttcccggagagagcaatgcctttgagatcgccgcaaggctgggactcgattctgaagtg
gtagagcgggcgagatccttcttgcgccccgagcagcgggaactttccgatttgatcaag
caccttaaagaggaccagttcgcagccagttcggctcgggctgaggccgagcttgagcga
gcagaagtcgaaaaattaaaggagaagttacggcgggaggaggaaaggctgcggaataag
cagcaggagatcctgtccatggcccatgaggaggcacgggagctggtacgcaccgccagg
cgggaagccgagcagttgatccgcttcctgagggagaagatgcgccaagaggatgcccgc
attgctctggaggaggctcaggcagtgcggcagaagctaggtgatctgtccggtcgaatc
gaagaaagggctgcggctacggaggaatccgcctttgccggcgatattccggatacgctg
aagcccggggatgttgtagccataccccgcttccatcaggaaggatatgttatttctccc
cccggtccggatggagaggtgctggttcaggtcggtgcgctcaagctccatctccccatc
aaggagctgcgccgcagtctgaaacgggataaacaaaagaaagaattgacagcgacgggc
agtagatccggtggtagaaccatcaaggaacatgcacaggtgtctccggagtttgacttt
cggggaatgcgggtggaggaaagcctcaaagagattgataaatacctggacgcggcctat
ctggcgggaataaacagggtttctctcatccatgggaaaggaacaggggccttaagggag
gctgtaagacagtacctttccaaacatcccttcgtggcttcctaccgcaacgggaattac
tacgagggggggacgggggttaccatcgtcgaattaaaataa
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