Thermacetogenium phaeum: Tph_c18090
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Entry
Tph_c18090 CDS
T02276
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tpz
Thermacetogenium phaeum
Pathway
tpz03030
DNA replication
tpz03410
Base excision repair
tpz03420
Nucleotide excision repair
tpz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tph_c18090 (polA)
03410 Base excision repair
Tph_c18090 (polA)
03420 Nucleotide excision repair
Tph_c18090 (polA)
03440 Homologous recombination
Tph_c18090 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpz03032
]
Tph_c18090 (polA)
03400 DNA repair and recombination proteins [BR:
tpz03400
]
Tph_c18090 (polA)
Enzymes [BR:
tpz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tph_c18090 (polA)
DNA replication proteins [BR:
tpz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Tph_c18090 (polA)
DNA repair and recombination proteins [BR:
tpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Tph_c18090 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tph_c18090 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
Taq-exonuc
DNA_pol_P_Exo
Motif
Other DBs
NCBI-ProteinID:
AFV12009
UniProt:
K4LVG7
LinkDB
All DBs
Position
complement(1825761..1828388)
Genome browser
AA seq
875 aa
AA seq
DB search
MILDGNSLVHRAFHALPLLTTSGGQFTNAVYGFITMLQKIVRQEKPDYLAVAFDRSRMTF
RHRDFEDYKANRKATPDELRPQFPLVKRVLQALRIPVLELDGFEGDDLIKAVVDAAEERG
FRVLIVTGDRDLLQLVSPQTSALITRKGISELECFTPETVRKKYGIDPAQVPDLKGLKGD
QSDNIPGVPGIGEKTAVRLLNQFGSLEGCLANLEKIPPRVANLLRQYSEQAVISKKLATL
SKDVPIKVDFGDLKVEEPDYDALIGIYQELEFKSLLKSLREEMPEAAAEPDDEDCRIVST
MPDLIALLDELKKAGEFALCFDRGSSSPLKAPLTRLGLAWGEESCAVVEFPSGRGQLREK
MLAAISGLLADPECAKLCHDAKAEMIICSRNGLELKGVSGDTMLAAYLLNPSLSSPALEE
IVLKYLGQVVSFDREVTRAARCARAIWKVWPVLRTSLERDELWELFSSLELPLSGVLARM
ELTGVRLDVAQLEEMSREFGKHLANLVGEIYALAGEGFNINSPKQLGYILFEKLKLPVIK
RTKTGYSTDAEVLDKLAPYHEIAGKLLEYRQFAKLKSTYVDGLQGLVDRETGKVHTTFNQ
TITATGRLSSTEPNLQNIPIKMGPGRKIRRAFVPSEPGWLILAADYSQIELRVLAHMSRD
ERLIADFLNGEDIHTRTAATVFGVAPEEVTPDLRRRAKGINYGIVYGITEYGLARDIGVS
REEAALYIANYFRQYPGVKRFIEETIAAARERGYVQTLLKRRRYLPDLLSSNRNVRSFGE
RTAINTPIQGSAADIIKLAMLRVDREMRERGLRARMILQVHDELVFELPKEELGVLVPLV
RSGMEKIMELAVPLRVDIEVGPNWYDLTKVDEADA
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
gtgattcttgatggaaacagcctggtgcaccgcgctttccacgctcttcctcttctcacc
accagcggtgggcagtttaccaacgccgtctacggttttatcaccatgctgcagaagatc
gtccggcaggagaagccggattatctggccgttgcctttgacaggagccggatgaccttc
aggcaccgggactttgaggactacaaggccaaccggaaggccactcctgacgaactgcgc
cctcaattcccgctcgttaaaagggttcttcaggctctgcgcattcccgttctggagctg
gacggcttcgaaggggatgacctgatcaaggcggtggtggatgccgccgaagagcggggg
ttccgggtcctcatcgtcaccggtgaccgcgatctgctccagcttgtttccccccaaacc
agcgctctcatcacgcgcaaaggaattagcgaactggaatgctttactccggaaaccgtt
aggaagaagtacgggatcgatcccgctcaggtgccggacctgaaaggcctcaagggtgac
cagagcgacaacatcccgggcgtacccgggatcggggagaaaaccgcagtcaggctgctc
aaccagttcggaagtctcgaggggtgccttgccaacctcgagaagatcccccccagggtg
gccaatctcctgcggcagtacagcgaacaggccgtcatcagtaagaagctggcgacactt
tcgaaggacgttcccattaaggtcgatttcggcgacctcaaggtggaggagccggattac
gatgccctgatcggcatctatcaggaactggagttcaaatcccttttgaagagcctccgg
gaagagatgcctgaagcggcggccgaacccgatgatgaggactgccggatcgtctctacg
atgcccgatctcattgccctcttggatgagttaaaaaaggccggtgagtttgccctgtgc
tttgacaggggctcttcttctcctcttaaggctcctctaacccggctcggcctggcctgg
ggggaagagagctgtgccgtagtggaatttccctccgggcgggggcagctgcgggagaaa
atgctggctgccatctccggcttgctggccgatccggaatgtgccaagctgtgccatgat
gccaaagcggagatgatcatctgcagccgcaacggcctggagcttaaaggtgtgagcggg
gataccatgcttgccgcctaccttttgaacccatccctttccagcccggcgctggaggag
atcgttctgaaatacctggggcaggtggtttcattcgacagggaagttacgagggctgcg
cgttgcgcccgggcgatctggaaagtatggccggttctgcgaacaagcctggagagggat
gagctctgggagctcttctccagcttggagctgcctctgtccggggttctcgcccggatg
gagctgaccggagtcaggcttgacgttgctcagctggaagagatgtcccgcgagttcggg
aagcatttggcaaacctggtcggggagatctacgccctggccggggaaggttttaacatc
aattcaccaaagcagctggggtacatcctctttgaaaagctgaaacttccggtgatcaaa
aggacgaaaaccggctacagcaccgatgccgaggtcctggataagctcgccccttaccat
gagattgcaggaaagctgctggaatacaggcagtttgccaaactcaaatctacctatgtc
gacggcttgcaggggctggttgacagggagacgggaaaggtccacaccactttcaaccaa
accataactgccacgggaaggttgagcagcaccgaacccaatcttcaaaatatccccatc
aaaatggggccagggaggaagatcaggagggcctttgttccctctgagccgggatggctg
atcctggctgcggattactctcagatcgagctgcgcgtcctcgcccacatgtcccgggat
gagaggctgattgccgacttcctcaacggggaagacatccacaccagaactgctgccacc
gttttcggggtagccccggaggaggtcactcccgacctgaggcgcagggcgaaggggatt
aactacgggatcgtttacggcatcaccgaatatggcctggcccgggacatcggggtgagc
agggaggaggccgccctctacatcgccaattacttccggcagtatcccggtgtgaagcgg
tttattgaggagaccattgctgctgccagggaacgggggtatgtccagacgctcttaaag
agaaggcgctacctccccgaccttttgagcagcaaccgcaatgtgcgttcttttggtgag
aggacggctatcaacacgcccattcagggcagtgcggcggatatcatcaagttggcgatg
ctgcgcgtcgacagggagatgcgggagcgggggctcagggcgcgcatgattctgcaggtg
cacgatgaactggtatttgaactgccgaaagaggaactgggggtactggttccccttgtc
cgcagcggtatggagaagataatggagctggccgtgcctttgcgggtggacatcgaagtg
ggacctaactggtacgatctcaccaaggtggatgaggccgatgcctga
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