Thermacetogenium phaeum: Tph_c19460
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Entry
Tph_c19460 CDS
T02276
Name
(GenBank) sigma54 specific transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
tpz
Thermacetogenium phaeum
Brite
KEGG Orthology (KO) [BR:
tpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpz03000
]
Tph_c19460
Transcription factors [BR:
tpz03000
]
Prokaryotic type
Helix-turn-helix
Other families
Tph_c19460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
PAS_4
PAS_9
PAS
AAA_5
Mg_chelatase
HTH_23
HTH_50
HTH_28
HTH_30
HTH_38
HTH_11
HTH_7
HTH_22
HTH_Tnp_ISL3
HTH_29
HTH_Tnp_1
AAA
DUF2089
HTH_20
AAA_2
AAA_16
PAS_8
HTH_IclR
HOATZ-like
Nop16
TetR_N
SoPB_HTH
Tape_meas_lam_C
TrmB
AAA_3
PAS_10
Motif
Other DBs
NCBI-ProteinID:
AFV12140
UniProt:
K4LJK6
LinkDB
All DBs
Position
complement(1969744..1971762)
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AA seq
672 aa
AA seq
DB search
MSIAHRALSDIALAWMKFVTTGELEFETLRPEIAESWQRCYQAGIDPYDGTCYDVLDSSE
LEFLREKHRDLIEIARPFMTNLYKFFEGSGYIVILTDAQGYILEAFGDEDTLKDAIGLNF
IKGANWTEDAVGTNAIGTALLLKMPIQVSGPEHYCRKHHAWTCSATPIFDHNGNVLGILD
LSGPSNEAHLHTLGMVVAAGEAIREQMRIRQKNRELTLANSQLSGIIQTMCEGVIAFDAR
GIIIRLNPASEQIIGRKSRDLVGKPVRDILGNRVHFIDKLLVGRDTFNEVEVMVDSVDGL
IHCLVSGKPILDDQGVFTGGVILLRPIERVQKLVNRFSGAQATFRFRDIIGESAGIREAI
RMASLAASSMSTVLLQGESGTGKELFAQAIHNRSPRRKGPFVAVNCGAIPRELIASELFG
YEGGAFTGAKRGGRPGKFELASGGTLFLDEIGEMPLEQQVALLRVLQERRLTRLGGDKVI
PVDVRVICATNKNLLGEVEKGNFRRDLYYRVNVITINIPPLRERPEDIPILFKHFLERIS
REWGKSFDGVDPEVVEHLKRYHWPGNVRELQNVVERMVSIAEGSRITAEYLPEEIYRPWH
SESCEASSFVQVARIEEEREKRKRMQAERERRRILELLSKHGGNISRVARELGVSRNTIY
RKMKIYNININK
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtctatagctcaccgagctttgtctgacattgcgttggcttggatgaagtttgtgact
acgggggaactcgaatttgagacgctgcggcccgaaattgcggaatcatggcagaggtgt
tatcaggcgggaattgatccgtacgacggcacctgttatgacgttttggattcctccgaa
ttggaattcctgcgtgagaagcacagggatctgattgagatcgccaggccgtttatgacc
aacctttataaattttttgagggatccggctatattgtgatactgactgacgctcaggga
tatattctagaagcgtttggtgatgaggatactctaaaagatgcgattgggctcaatttt
attaaaggggctaactggaccgaggatgctgttgggaccaacgctatcggaactgcactg
ttactcaaaatgcccattcaggtatcaggcccggaacattactgccgcaaacaccatgcc
tggacctgttcggctactccgatattcgatcataacggaaacgtattggggattctagat
ctatcgggtccctcgaatgaagcgcatctgcataccctgggtatggtagtggcggcggga
gaagccatccgggaacagatgcggatccggcagaagaaccgggaacttacccttgccaac
agccaactatcaggcattattcagacaatgtgtgaaggagttattgcttttgatgctcgg
ggtataattatacggctcaaccctgcgtcggagcagatcatcggtaggaaaagtcgggat
ttggtaggtaagccggtgagggatattctgggaaaccgtgttcattttatagataagcta
ctcgttggtcgtgatacctttaacgaagtggaggtaatggtggattccgtagacgggctg
atccattgtttggtatcaggcaagccgattttagatgaccaaggtgtctttacgggcggc
gtgatactcctccgtccgattgagcgggtgcagaagctggttaaccgtttcagtggggcg
caggccacatttcgtttcagggacataattggggaaagtgcggggattcgggaagcgatc
aggatggcgtcattggcggcatcgagcatgtccaccgtactgctgcagggggagagcggc
acggggaaggagctttttgcgcaggccattcacaatcgcagtcctcgcaggaagggtccc
tttgtggcggtaaactgcggggctataccgagggagctgattgccagcgagctgtttgga
tacgagggaggggcatttaccggagcgaagcgagggggtaggcccggcaaatttgagctg
gcgtcggggggtacactttttctggatgagattggggagatgccgctggagcaacaggta
gccctgctgcgggtattgcaggagaggaggctcacccgtcttggtggtgataaggtgatt
ccggtagatgtgcgggttatctgtgccaccaataagaatcttctgggtgaagtggagaag
gggaactttcggcgagatctttactaccgggtgaacgtaatcacgattaatattcctccg
cttcgggagcgtcctgaagatataccgatactgttcaaacactttttggagaggatcagc
agggaatgggggaagagttttgatggcgtagacccggaggtagtggagcatctgaagcgg
taccactggccggggaatgttcgggagctgcagaatgtggtggagaggatggtgagcata
gcggaggggagtcggatcacggcggaataccttcctgaagaaatttacaggccgtggcat
tcggaaagctgcgaggcgtcttcatttgtgcaggtggcaagaatagaggaggagagggag
aagaggaaaaggatgcaggccgagagggagcgcaggaggatcctggaactgctgtccaaa
catgggggcaacatcagccgagttgccagggagctgggggtctcccgcaacaccatttac
aggaagatgaagatctataatataaacataaacaaatga
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