Thermacetogenium phaeum: Tph_c20420
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Entry
Tph_c20420 CDS
T02276
Symbol
rocR
Name
(GenBank) arginine utilization regulatory protein RocR
KO
K06714
arginine utilization regulatory protein
Organism
tpz
Thermacetogenium phaeum
Brite
KEGG Orthology (KO) [BR:
tpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpz03000
]
Tph_c20420 (rocR)
Transcription factors [BR:
tpz03000
]
Prokaryotic type
Helix-turn-helix
Other families
Tph_c20420 (rocR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_9
HTH_8
PAS
PAS_4
AAA_5
PAS_8
AAA_16
HTH_30
bpMoxR
AAA
AAA_2
Mg_chelatase
AAA_7
PAS_7
MCM
HTH_1
DUF3577
DUF815
AAA_3
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
AFV12236
UniProt:
K4LGV3
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All DBs
Position
complement(2070354..2071790)
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AA seq
478 aa
AA seq
DB search
MQGDDSNRAERLTMLENTIEAISEGIIITDVDGTIIYYNRALERMDGLSRDEVIGRHLMD
VYRVTPETSEHLTVVKTGKPFKELAKIHYTAEGREISLVSSTYPVYMGNKVIGAFSVCRD
VTKLKDLLNEKVLLQKQMHGEEGGSGFKNGTRYTFADFVYASREMEKLVRQARKAAKTDC
AVLVYGETGTGKEIIVQSIHNASSRRDEPFVGINCAAIPETLLESLLFGTVKGAFTGAVD
SVGLIEQAGNGTLFLDEINSMSPSLQAKLLRVLQERTFRRVGGKKEIPVSCRIFSSTNMD
PWECIINGTLREDIYYRFAVFTIYIPPLRERPEDIKALINHFIGKYGKIYGQLGVRMDSQ
LKEAFLHYRWPGNVRELEHIIESCMSMLDPNENLISFEHLPPHVSTRFAKKTVSRPFKRS
ISGGTLHQILKDYEKQVIEETLARNGGNISRAARELGILRQNLQYRMRRLGIRAEAVR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggatgacagcaacagggccgagcgtcttaccatgctggaaaacacgattgag
gcgatctccgaaggcatcatcattaccgacgtagacgggactatcatctactacaaccgg
gccctggagaggatggatggtctcagtcgggatgaagtgatcgggcgtcacctgatggat
gtgtaccgggttacgccagagaccagtgaacacctcacggtcgtcaagaccggaaagcct
tttaaggagcttgccaagattcactacacggcagaagggcgggaaatcagtctggtatcc
agcacctatcccgtttatatgggaaacaaagtgattggggccttttccgtctgccgcgat
gtgacgaagcttaaagacctcctcaatgagaaagttctgctgcagaagcagatgcatggt
gaagaaggaggatcggggtttaagaatggaactcgctataccttcgctgatttcgtttac
gccagccgggagatggaaaagctggtgcggcaggcgcgcaaggcggccaagaccgactgc
gctgttctggtttacggcgagaccgggaccggcaaggagataatcgttcagagcattcac
aatgccagcagcaggcgggatgagccctttgtggggatcaactgcgcggcgatcccggag
acgctgctggaaagcctcctcttcggaaccgtcaagggggcttttaccggcgcggtggac
agcgttggattgatcgaacaggcggggaatgggactctcttcctggatgagatcaactcc
atgagcccctctctgcaggccaagttgctcagggtgctgcaggagaggaccttccgcagg
gtgggcggcaagaaggaaataccggtcagctgcaggattttcagctcgacgaacatggac
ccctgggagtgcatcatcaacggcacactgcgggaggacatctactatcgttttgctgtt
tttacaatttatatcccgccgttgcgggaaaggccggaggatatcaaggctctgatcaat
catttcatcggcaaatacggtaagatctacggtcagctcggtgtccggatggattcccaa
ctgaaagaggcgtttctgcactacaggtggcccggtaatgtccgggagctggagcacatc
atcgaaagctgcatgtccatgctcgatcccaacgaaaatctgatctccttcgaacatcta
cctcctcatgtcagcacaagatttgcgaagaaaacggtatcccgacctttcaaacgcagt
atttcaggcggcactctccaccagatcctgaaggattatgagaaacaggtgatcgaggag
actctggcgagaaacgggggaaatatcagcagggcggccagggaactggggattctgcgc
cagaatctgcagtatcggatgcgccggttggggatccgggcggaagctgtccggtga
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