Thermacetogenium phaeum: Tph_c25570
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Entry
Tph_c25570 CDS
T02276
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tpz
Thermacetogenium phaeum
Pathway
tpz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tph_c25570 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpz03021
]
Tph_c25570 (rpoA)
03400 DNA repair and recombination proteins [BR:
tpz03400
]
Tph_c25570 (rpoA)
Enzymes [BR:
tpz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tph_c25570 (rpoA)
Transcription machinery [BR:
tpz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tph_c25570 (rpoA)
DNA repair and recombination proteins [BR:
tpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tph_c25570 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
AMIN-like
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AFV12731
UniProt:
K4LIA3
LinkDB
All DBs
Position
complement(2584419..2585369)
Genome browser
AA seq
316 aa
AA seq
DB search
MLVEIEKPRIECVEKDEKDTYGKFVVEPLERGYGTTLGNSLRRVLLSSLPGAAVTSVRIE
GVLHEFSTIPGVREDTTDIILNLKGLALRMYGEGPVTIRIEAQGEGVVTAGDIITGPDIE
VVNPELYIATLEPDGRLFMEMTVEKGRGYVPAERNKKAEHVIGDIPVDSIFSPIRKVNYT
VENTRVGQQTDYDRLILEVWGNGVLTPEEAVSQAADIIIKYLKLFTGLTENTAEQDPEPE
EQVDEKSKILEMPIEELELSVRSYNCLKRAGINTVEDLTQRTEEEMMKVRNLGKKSLEEV
DRKLAELGLSLKKSED
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgtcgagattgaaaagcctcgtattgagtgtgtagagaaggacgagaaggatact
tacggtaaattcgtggtggagccgctggagcgcggctacgggacgacgctgggcaacagc
ctgcgccgggttctcctctcttcactgccaggagcggccgtaacctcggtgcggattgaa
ggcgtgctccacgagttcagtaccataccgggtgtgcgcgaggataccaccgatatcatc
ctgaacttgaagggtctggccctgaggatgtacggagaggggcctgtgaccatccgtatt
gaggcccagggggagggagtggttaccgccggagatatcatcaccggcccggatattgag
gtggtgaatcctgagctttatatagcgaccctggagccggacggccgcctctttatggaa
atgaccgtagagaaggggcgcgggtatgttcccgcggaaagaaacaagaaggcggagcat
gtaatcggagacattccggttgattccatcttttcccctattcgcaaggtcaattacact
gtggagaacacccgggtggggcaacagaccgactacgaccggctgatcctggaggtgtgg
ggtaatggcgtcctgacgccggaggaggccgtcagtcaggctgccgatattatcatcaag
tacctcaagctgttcaccggtttgaccgaaaataccgccgaacaggatccggaaccggag
gaacaggtcgatgagaagagcaagatcctggaaatgccgattgaggagcttgagctatcg
gtgcgctcttacaattgtttgaagcgcgccggaatcaataccgttgaggatctgacccag
cgtaccgaggaagagatgatgaaggtacgcaacctgggtaaaaaatcgctggaggaagtt
gacagaaaactggccgaactgggactttctctgaagaagagcgaggattag
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