Thermacetogenium phaeum: Tph_c28220
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Entry
Tph_c28220 CDS
T02276
Symbol
hup
Name
(GenBank) DNA-binding protein Hup
KO
K03530
DNA-binding protein HU-beta
Organism
tpz
Thermacetogenium phaeum
Brite
KEGG Orthology (KO) [BR:
tpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpz03032
]
Tph_c28220 (hup)
03036 Chromosome and associated proteins [BR:
tpz03036
]
Tph_c28220 (hup)
03400 DNA repair and recombination proteins [BR:
tpz03400
]
Tph_c28220 (hup)
DNA replication proteins [BR:
tpz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Tph_c28220 (hup)
Chromosome and associated proteins [BR:
tpz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Tph_c28220 (hup)
DNA repair and recombination proteins [BR:
tpz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Tph_c28220 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_bac_2
DUF937
Motif
Other DBs
NCBI-ProteinID:
AFV12987
UniProt:
K4LLL1
LinkDB
All DBs
Position
complement(2843546..2843818)
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AA seq
90 aa
AA seq
DB search
MNKAELIAAVAEKAGFAKKDAEKAVTAVFAAIEEALARGDKVQLVGFGTFEVRERAARTG
RNPQTGEEIQIAATRVPAFRAGKALKDAIG
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaggcggaattgatcgctgctgttgcggagaaagcaggctttgctaaaaaggat
gcggaaaaggctgtcaccgcggtttttgctgccattgaagaggccctggccaggggtgat
aaagtgcagctggtggggtttgggaccttcgaggtgcgggaacgggcggcccgtaccgga
cgcaacccgcagaccggtgaagagattcagatcgccgctacccgggttcctgctttccgt
gccggcaaggccctgaaggatgccatcggttaa
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