Truepera radiovictrix: Trad_0232
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Entry
Trad_0232 CDS
T01254
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tra
Truepera radiovictrix
Pathway
tra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Trad_0232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tra03400
]
Trad_0232
Enzymes [BR:
tra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Trad_0232
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Trad_0232
DNA repair and recombination proteins [BR:
tra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Trad_0232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
DUF6011
Zn_ribbon_IS1595
Auto_anti-p27
Zn_ribbon_TFIIB
Zn_ribbon_6
DZR
Zn_ribbon_RRN7
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ADI13372
UniProt:
D7CY12
LinkDB
All DBs
Position
269038..269841
Genome browser
AA seq
267 aa
AA seq
DB search
MRRELEPYVRGRVILAATLVDAPPGPKYARLERAVGQRILAVTRRGKFLILPLSGGDDLI
IHLGMTGILSPEPAPKHVRVRLELSEGGALYFRDARRFGRFLVVPSGAYEALPTLSAMGP
EPLSAAFTGDALYRALQRSRTPIKPFLLSQKPVSGVGNIYADEALWRARIHPLTPANEVS
RAKAAQLAGAIREVLAASLRAKGTTLQDYRTVNGEVGAYALQLQAYGRAEKPCPRCGSPL
RKVTLGGRGTHFCARCQRPPRARPGAP
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccgcgagctcgagccctacgtccggggtcgggtgatcctcgcagccaccctcgtc
gacgcccccccggggcccaagtacgctcggctggagcgcgccgtgggccagcgcatcctg
gcggtgacgcggcgcggcaagtttttgatcctccccctgtcggggggggacgacctgatc
attcacctcgggatgacgggtattttgagccccgagcccgcgcccaagcacgtccgcgtg
cggctcgagctctccgaggggggcgcgctctactttcgggacgcgcggcgcttcggccgc
tttctggtggtgccctcgggcgcctacgaggcgctgccgactttgagcgcgatggggccc
gaacccttgagcgcggcctttacgggggacgcgctctaccgggcgctgcagcgctcgcgc
acgcccatcaaaccctttttgctctcgcaaaaaccggtctcgggggtcggcaacatctac
gccgacgaggcgctctggcgcgcgcgcatccaccccttgacgcccgctaacgaggtctct
agagccaaagcggcgcagctcgctggggccatccgtgaggttctggcggcgagcttgcgc
gccaaagggacgacgttgcaggactaccgcacggtcaacggcgaggtgggcgcctacgcg
ctccagctgcaggcctacggccgcgccgaaaaaccgtgcccgcgctgcgggagtccgctg
cgcaaagtgaccctcggggggcgcggtacgcacttttgcgcgcgctgccaacgcccaccc
agagcgcgcccgggcgcaccgtag
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