Entry
Name
(GenBank) CRISPR-associated protein Cas6
KO
K19091 CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
tra Truepera radiovictrix
Brite
KEGG Orthology (KO) [BR:tra00001 ]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:tra02048 ]
Trad_0432
Prokaryotic defense system [BR:tra02048 ]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
Trad_0432
Subtype I-D factors
Trad_0432
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
complement(477309..478052)
Genome browser
AA seq
247 aa AA seq DB search
MSLVALVLPLTGAQKPEAVHVRGALYALLKEHAPELHDRQDLKPFTVSVGGAAKDHPPFI
RLTFLSEPLYTALAPALHDLPRRPLSLGDRTYTVTDVLQEGHPWAGATTYPRLFQTPGDA
DLSLHFATPTVFRRHGANYPLPEPRLVLGSLIERWNLYAPLAVPSEVASRLTEGCVPRFF
ELRSRTVYAHDPFTGFLGRVTFHLRGASADEAHWLAILGRFAFYSGVGAKTTLGFGQVRP
YRPTPGA
NT seq
744 nt NT seq +upstream nt +downstream nt
atgtccctcgtcgccctcgttctcccgctcaccggcgcccaaaaacccgaagccgtccac
gtccgcggcgccctctacgcccttctcaaggagcacgcgcccgaactccacgaccgccaa
gacctcaaaccctttaccgtctccgtagggggtgcggcaaaggaccacccgccctttatc
cgcctgacgtttttgagcgaacccctctacaccgcgctcgcccccgccctccacgacctc
ccgcggcgccccctgagtctcggcgaccgcacctacaccgtcaccgacgtgctccaagag
ggccacccttgggccggagcgaccacctacccccgcctctttcaaacgcccggggacgcc
gacttgtcgctgcacttcgccacccccacggtctttcgtcgccacggcgccaactacccg
ctccccgaaccccgcctcgtgctcgggtcgctgatcgagcgctggaacctctacgccccc
ctagcggtcccctccgaggtcgcctcacgcctgaccgaggggtgcgtgccccgctttttt
gaactgcgcagccgcaccgtctacgcccacgacccctttaccggctttctcggccgcgtc
acctttcacctccgcggcgccagcgccgacgaggcccactggctcgccatcctcggccgc
ttcgccttctatagcggcgtcggcgccaagaccaccctcggcttcggccaggtgcgcccg
taccgccccaccccaggtgcataa