Truepera radiovictrix: Trad_0474
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Entry
Trad_0474 CDS
T01254
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tra
Truepera radiovictrix
Pathway
tra03410
Base excision repair
tra03430
Mismatch repair
tra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Trad_0474
03430 Mismatch repair
Trad_0474
03440 Homologous recombination
Trad_0474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tra03400
]
Trad_0474
DNA repair and recombination proteins [BR:
tra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Trad_0474
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Trad_0474
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Trad_0474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADI13611
UniProt:
D7CS79
LinkDB
All DBs
Position
complement(525391..527568)
Genome browser
AA seq
725 aa
AA seq
DB search
MRPSAPPHPTAPAARWAVRPSAPPAEVARLVRAFSLPPLVASVLWARGLRSPEALQPPFE
RTRIPALATAAERLAEALARGKRILIHGDYDADGISGTAVLTLGLRALGGRVTPFIPNRL
RDGYGVHPARVAEHAAGADLFITVDCGISNRAEVAALQAAGVEVIVTDHHHPGQVLPDCL
TVHPSLSPYAKKGLPELTGAGVAYHLLWALHEHLGLEAPVEYSDLATIGTVADVAPLMGE
NRALVTAGLAQLARSRWPGLRAMMARTLSHGRAPSAREVAFVLAPRLNAAGRLGEADLGL
ELLTTASERRALELASYLDARNADRRKVQDAMLGEALKLVDPEAPALVLERPSWHPGVMG
IVASKLLERFYKPVFIIAQGKGSVRSTPGISAVGGLEYARDLLERFGGHSQAAGFAIREG
CVEAFRERVYDYARQHPTPRPELVADTLLAPDEIDTDLYRALCTLEPYGEGHPAPRFALC
APLEGVGCMGEGGKHLNLRVGGVRGVAWDRGADAPALRAAGVINAAVTLRENTWQGKTQL
ELLADDVRPAAPLELSTPSAVRRPLYRGPPPEGVDARWVREVPLSADLLQLTAPLAALVR
RGEPLSFDLPEAELGRLAALPLPPTLSEVRRAFVCLRRGTPLPADTPKAQLCRRILEELE
LVGPSGHALRGQKRDPYSSESFVKGLLERYKLQGFLKAYRALSDVAFAETVWTLFGPSEA
GPKRT
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccccagcgctcccccccaccccaccgcacccgcggcgcgctgggcggttcggccc
agcgcgccgcccgccgaggtcgctcgcctggtgcgcgccttttcgctcccgccccttgtg
gcgagcgtcctctgggcgcgcggcctgcgcagccccgaggcgctgcaaccgccttttgaa
cgcacccgcatccccgcactcgcgacggcggcagagcgcctcgccgaggcgctggcacgg
ggcaaacgcatcctcatccacggcgactacgacgccgacggcatcagcggcacggccgtc
ttgacgctcggcctgcgcgccctgggcggccgcgtgaccccctttatccccaaccgcctg
cgcgacggctacggggtgcacccggcgcgggtcgccgaacacgccgcgggcgccgacctc
ttcatcaccgtcgactgcggcatctcgaaccgcgcggaggtcgcggcgctccaagccgcc
ggggtcgaggtcatcgtcaccgaccaccaccaccccggccaggtgctccccgactgcctc
acggtgcacccctcgctctccccgtacgccaaaaaggggctccccgagctcaccggcgcg
ggcgtcgcctatcacctgttgtgggcgctccacgagcacctcgggttggaagcgcccgtg
gagtacagcgacctcgccaccatcggcaccgtcgccgacgtcgcccccctgatgggtgaa
aaccgcgcgctcgtcacggcgggtctggcgcagctcgctagaagccgctggccggggctg
cgcgcgatgatggcgcgcacgctctcccacgggcgggcgccgagcgcgcgcgaggtcgcc
ttcgtgctggcgccgcgcctcaacgccgcggggcgtctgggcgaggccgacttggggctc
gagctcctcaccaccgcctccgagcgccgcgcgctggagctcgcgagctacctagacgcc
cgcaacgccgaccgccgcaaggtgcaagacgcgatgttgggtgaggccctcaaactcgtc
gatccggaggcgcccgcgctggtgctcgagcgccccagttggcacccgggcgtcatgggc
atcgtggcgagcaagctcttagagcgcttttacaaacccgtctttatcatcgcgcagggc
aagggctcggtgcgttcgaccccggggatttcggccgtcggcgggcttgaatacgcccgc
gaccttctggagcgcttcggtgggcactcgcaggcggcgggcttcgccatccgggagggc
tgcgtcgaggcgtttcgcgagcgcgtgtacgactacgcccgccagcacccgaccccgcga
cccgagctcgtcgccgacaccctgctcgcgcccgacgagatcgacaccgacctctaccgc
gcgctctgcaccctggagccctacggcgagggccaccccgcaccccgcttcgccctctgc
gcgccgctcgagggcgtcgggtgcatgggggaagggggcaagcacctcaacctgcgcgtg
ggcggggtccggggggtcgcgtgggaccgcggcgcagacgcccccgccctgcgggccgcc
ggggtcatcaatgcggccgtcaccctgcgcgagaacacctggcagggcaaaacgcagctc
gagctcctggccgacgacgtgcgccccgccgcgccgctcgagctaagcaccccctccgcg
gtgcggcgaccgctctaccgcggcccaccccccgaaggggtcgacgcgcggtgggtgcgc
gaagtccccttgagcgccgacctcctgcagctcaccgcacctttggcggcgctcgtgcgg
cgcggcgagcccctctctttcgacctccccgaggcggagctggggcgcctagcggcgctc
cccctcccaccgactttgagcgaggtgcgccgcgctttcgtctgcctgcggcgcggcacc
cctttgcccgcggacacccccaaggcgcagctctgccggcggatcttggaggagttggag
ctggtcggcccttcgggccacgccctccggggccagaagcgcgacccttacagctccgag
agcttcgtcaaagggcttttggagcgctacaaattgcagggctttctcaaggcctaccgc
gccctctcggacgtggcgttcgcggagacggtctggacgctctttggcccttcggaggcc
gggccgaagcgcacgtaa
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