Truepera radiovictrix: Trad_0822
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Entry
Trad_0822 CDS
T01254
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tra
Truepera radiovictrix
Brite
KEGG Orthology (KO) [BR:
tra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tra03016
]
Trad_0822
Enzymes [BR:
tra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Trad_0822
Transfer RNA biogenesis [BR:
tra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Trad_0822
Prokaryotic type
Trad_0822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ADI13956
UniProt:
D7CU58
LinkDB
All DBs
Position
complement(889682..890464)
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AA seq
260 aa
AA seq
DB search
MRRIKLTLEFDGTDFFGWQVQAGAAHPVRTVQGVLEAALATLPGARPKAHAAGRTDAGVH
ALAMVAHYDTDDRIPVAKVPAALNARLPPDVRVLHAEEVPRSFEAQFSCCYRRYLYRMRL
LRASRAGSALERRRVLFVPGALDLEAMQRAAPRFEGTRDFAALATQESRTTVRTVYRCRL
GAAGPDLTLDIAADGFLRNMVRAVVGTLLWVGEGKLAPEDVSALLAARDRRRAGPNAPPH
GLYFAEAGYEPWGTRAEDAE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtgcggcggattaagctgaccctcgagttcgacggcaccgactttttcggttggcaggtg
caagcgggcgcggcgcaccccgtgcgcacggtgcagggggtgctcgaggcggcgctcgcc
accctccccggcgccagacccaaagcgcacgctgcgggccgcaccgacgcgggcgtgcac
gcgctcgcgatggtcgcgcactacgacaccgacgaccgcatccccgtcgccaaggtgccg
gcggcgctcaacgcccgcctcccgccggacgtgcgggtgctgcacgccgaggaggtgccg
cggagcttcgaggcgcagtttagctgctgctaccgccgctacctgtaccggatgcggctc
ctgcgggcgtcgcgcgccgggtcggcgttggagcggcgccgcgtcctcttcgtgccggga
gcgctcgacctagaggccatgcagcgcgccgctccccgtttcgaggggacgcgcgacttc
gccgcgctcgccacccaagagtcgcgcacgacggtgcgcacggtctaccggtgccgcctc
ggggccgctggccccgaccttaccttagacatcgccgccgacggttttttgcgcaacatg
gtgcgcgccgtggtcggcacgctcctgtgggtcggcgagggcaagctggctccggaggac
gtgtccgctctgctcgccgcgcgcgaccgccgccgcgccggaccgaacgcgccgccgcac
gggctctacttcgccgaagcggggtacgaaccgtgggggacgcgcgccgaggacgcggag
tag
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