Truepera radiovictrix: Trad_1105
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Entry
Trad_1105 CDS
T01254
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tra
Truepera radiovictrix
Brite
KEGG Orthology (KO) [BR:
tra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tra03400
]
Trad_1105
DNA repair and recombination proteins [BR:
tra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Trad_1105
Archaeal homologous recombinant proteins
Trad_1105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_15
Lge1
MMR_HSR1
nSTAND_NTPase5
AAA_21
MamL-1
Motif
Other DBs
NCBI-ProteinID:
ADI14232
UniProt:
D7CVW9
LinkDB
All DBs
Position
1188672..1191464
Genome browser
AA seq
930 aa
AA seq
DB search
MRPLRLELQGFGCFREVTAVSFDDLELFAISGPTGAGKSTLLDAMTYALYGSTARLGRQP
GTTLFSAGKEQLAVAFEFALGAELYRVTRVAERKGGRSPKSEVRLEAFQGGVWRQLPESE
KIAEANRKVEALVGLDYDSFTRAVLLPQGAFDQFLRGSAKERIKLLTSLLGLERVERMQR
LAGERARLAKARMQGLTERLEGDYAGVTPERRGALRRELEAAEGSQRELTAQRAALGERL
RDLEALAVLAERAQCARARLEALRAQAAEIAAARQALEHARAAQALEPPLEAEAALRARL
EGVRREAAACAARAERAEAELERAQAALQEAAAAHARVPELSAQLEGLAEVRPLMAQLRA
RGGDLALAQETLPASQAADWDTAWDALGRLEAALPGLKRAQEDAQEAAAAAERAERAVTE
TEATIARTKEQLRVTCEEGKAAGAHKERCKEALEAARAQDQAAALRPHLHVGEPCPVCDQ
VVRDLPPPRPSQVAALQRAFDDAEARLQALRERYQAEKGRLGMLRQTLDDRREALERAQA
LRTRQTARLAEAEAVFRELGTTDPEALARLLRARRRELLVRLAQRICERTGGRDPEVAYR
ALSRERGALEAALRTAQSALAEARAARERERAAASAAASRLRDQEAEALAAAQRLSEALA
QSPFKDAAAVRQAALAADRQAALATRLERYARDLEAAERESAKFSAELAGRTFDAEALSA
VRRELSETEAALEAAQRRVGELSGELGRLERQLERAKALRQELAQARDEASLYTELDRDL
HTQRFPSYLLDRVQRELALRASDILRRVTDGRFDLRFEGGEYSVLDAWSGELRSAKTLSG
GESFITSLALALALSDTLAGSTALGALFLDEGFGTLDAETLDAVAGVLESLTVTGRMVGV
ITHVQELTERLPARLIVRKTPAGSVAAWEV
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
gtgaggccgctccggctcgagctgcagggcttcgggtgcttccgcgaggtgacagcggtc
agcttcgacgacctcgagctcttcgccatctcggggccgacgggggcggggaagtcgacg
ctgctcgacgcgatgacctacgccctttacgggtcgacggcgcgcctcggcagacaaccc
ggtacgaccctctttagcgccggcaaagagcagctcgcggtggcttttgagtttgcgctc
ggcgcggagctctaccgcgtgacgcgcgtcgccgagcgcaagggggggcgcagccccaag
agcgaggtgcgcctcgaagcgttccagggcggggtgtggcggcagctccccgagagcgaa
aagatcgccgaggccaaccgcaaggtcgaggcgctcgtcggtctcgactacgactcgttt
acccgcgccgtgctgctgccgcagggcgctttcgatcagtttctgcgcggcagcgccaag
gagcgcataaagctgctcacgagccttttggggttggagcgggtcgagcggatgcagcgc
ctcgccggtgaacgggcgcggctcgccaaagcgcggatgcagggcctgacggagcggctc
gagggggactacgcgggggtgacgccggagcgccgcggggcgctccggcgcgagttggag
gcggctgaggggtcgcagcgcgagctcacggcgcagcgcgccgcgctcggcgagcgcttg
cgcgacctcgaggcgctagcggtgctggccgaaagggctcagtgcgcccgggcgcgcctc
gaggcgctgcgggcgcaggcggcggagatcgcggcggcgcgccaggcgctcgagcacgcc
cgcgccgctcaggcgctcgagccgccgctggaggccgaggcggcgctgcgggcgcggctc
gaaggggtgcggcgcgaggcggcggcgtgcgccgctcgcgccgagcgcgccgaagccgag
ctcgagcgcgcgcaggcggcgctgcaggaggcggccgccgcccacgcgcgcgtacccgaa
ctcagcgcgcagctcgaggggctcgccgaggtgcgccccctgatggcgcagcttagggcg
cgcggcggcgacttggcgctcgctcaagagacgctgccagcgagccaagcggccgactgg
gacaccgcctgggacgccctagggcgcctcgaagcggccctgccggggctgaagcgcgcc
caagaggacgcccaggaggcggcggccgccgccgagcgcgccgagcgcgccgtgaccgag
accgaggcgaccatcgcgcgcaccaaagagcagctgcgcgttacctgcgaggagggcaag
gcggcgggggcgcacaaggagcggtgcaaagaggcgctcgaggcggcgcgggcgcaggac
caggcggcggcgctgcgcccgcacctgcacgtcggggagccgtgtccggtctgcgaccag
gtcgtgcgtgacctcccgccgccccgtccgagccaggtcgcggcgctgcagcgcgccttt
gacgacgccgaagcgcgcctccaagcgctgcgcgaacgctaccaggcggagaaagggcgc
ttggggatgcttcgccaaaccctcgacgaccgccgcgaggccctcgagcgcgctcaggcg
ctccgaacgcgccagacggcgcgcttggccgaagctgaagccgtctttcgcgagctcggt
acgaccgaccccgaggcgttggcgcgccttttacgggctcgccgacgcgagctgttggtg
cgcctcgcgcagcggatctgcgagcggaccggtggccgcgacccggaggtcgcttaccgc
gccctgagccgcgaacggggggcgctcgaggcggccctgcgaacggcccagagcgctctg
gcggaggcgagagcggcgcgcgagcgcgagcgcgccgcagcgagcgccgcggcgtcgcgg
ctgcgcgaccaggaggccgaggccctcgcggctgcgcagcgcctctcggaggcgctcgcg
cagagcccctttaaagacgccgcggcggtgcggcaggcggcgctagccgcagatcgccaa
gcggcgctcgccacccgtctggagcgttacgcgcgcgacctcgaggcggccgagcgggag
agcgctaagttcagcgcggagctcgcggggcgcaccttcgacgctgaggcgctcagcgcc
gtgcggcgcgagctatcggagaccgaagcggccctcgaggccgcgcagcggcgcgtcggt
gagctctcgggcgagctcgggcgcctcgaaaggcagctggagcgggcaaaggcgctgcgc
caggagctcgcgcaggcgcgcgacgaggcgagcctctacaccgagctcgaccgcgacctg
cacacccagcgcttcccctcgtacctgctcgaccgggtgcagcgcgagttggcgctgcgc
gcctcggacatcttgcggcgcgtgaccgacgggcgcttcgatctgcgcttcgaagggggt
gagtatagcgtgctagacgcctggagcggtgagctgcgaagcgccaaaaccctctctggg
ggcgaatcgtttatcacctcgctggcgctggccttggcgctctccgacaccctggcgggc
agcaccgcgctgggcgctctgtttctcgacgagggcttcggcaccttagacgccgagacc
ctggacgcggtcgcgggggtgctcgagtcgctgaccgtcaccggccgcatggtcggcgtg
atcacgcacgtccaggagctcaccgaacgtctccccgcgcggctcatcgtgcgcaagacg
ccggcggggtcggtagcggcgtgggaggtctga
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