Truepera radiovictrix: Trad_2096
Help
Entry
Trad_2096 CDS
T01254
Name
(GenBank) glycoside hydrolase family 43
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
tra
Truepera radiovictrix
Pathway
tra00520
Amino sugar and nucleotide sugar metabolism
tra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
Trad_2096
Enzymes [BR:
tra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
Trad_2096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
Motif
Other DBs
NCBI-ProteinID:
ADI15210
UniProt:
D7CRC2
LinkDB
All DBs
Position
complement(2268715..2270352)
Genome browser
AA seq
545 aa
AA seq
DB search
MSETLTDTLSPPRTDEARAYIQNPILRGFNPDPSIVRVENDFYIATSTFEWFPGVQLHHS
RDLVHWRLVGRALDRRSQLDMIGNPDSGGVWAPHLSYADGLFYLIYTDVKTWGVREPFKD
AHNYLVTAPDICGPWSEPVYLNSSGFDPSLFHDVDGRKWLLNMIWDHRKGKNPFGGILLQ
EFDPAAGELVGPVHNIFRGTHLRVTEGPHIVRKDGFYYLLTAEGGTTYEHAVTLARSKTL
TGPYEVHPDNPLLTSRGRPELELQKAGHGSLVETQTGEWYLAHLCGRPLSPLGRCNLGRE
TALQRLEWPRGDWPRLAGGDNAPKLQVPAPALPAHPFPPENERDDFDAPTLSPHWQTLRV
PHDESWLSLRERPGFLRLRGRESLISRHRQSLVARRLQAHVAEAETCVEFEPETFQQMAG
LVAFYQANNWVYLRLSRDEVLGKSLNILTCDHSVYDEALDEDVSVEGAARVFLKVRFERE
TFRFAYATEPGAWREVGPRFDAGKLSDDYCQGLSFTGTFIGLCAQDLSGRRRHADFDYFS
YREDA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaacgttaaccgataccctgtctcccccccggaccgacgaagcgcgggcgtac
atccaaaaccccatcctgcgcggtttcaaccccgacccttcgatcgtgcgcgtcgagaac
gacttctatattgccacctccaccttcgagtggtttcctggcgtgcagctgcaccactcg
cgcgacctcgtgcattggcggctcgtggggcgcgcgctagaccggcggagccagctcgac
atgatcggcaaccccgactcgggtggggtgtgggcgccccacctgagctacgccgacggg
ctcttttacctgatctataccgacgtcaagacgtggggggtgcgcgaaccttttaaggac
gcgcacaactatctcgtcacggcccccgacatctgtggcccgtggtcggagcccgtgtac
ctcaactcgagcggtttcgacccatcgctctttcacgacgtagacgggcgcaagtggctg
cttaacatgatctgggaccaccgcaaggggaaaaaccccttcggtggcattctcctgcag
gagttcgacccggccgccggggagttggtcgggccggtgcacaacatctttaggggtacc
cacttgcgcgtgaccgaggggccgcacatcgtccgcaaagacggcttttactatctcctc
accgccgaagggggcacgacgtacgagcacgccgtaacgctcgcgcgctcgaaaacgctc
accgggccctacgaggtgcaccccgacaacccgctcctgacctcgcgcggcaggcccgag
ctcgagctgcaaaaagccggccacggctcgctggtcgagacgcagacgggcgagtggtac
ctcgcgcacctctgcggtaggccgctctcgcccctagggcgctgcaacttgggccgcgag
acggcgctgcagcggctcgagtggccgcgcggcgactggccgcgcttggcgggcggcgac
aacgcgcccaagctgcaggtcccggcgcccgcgctcccggcgcaccctttcccccctgaa
aacgagcgcgatgactttgacgcgcccacgctgagcccgcactggcagacgctgcgcgtc
ccgcacgatgagagctggttgtcgctgcgtgagcgtcccggctttttacgcctccggggg
cgcgagtcgctcatctcgcggcaccgtcagagcctcgtggcgaggcgtttgcaagcgcac
gtcgcggaggcggagacgtgcgtagagtttgaacccgagacgtttcagcagatggcgggg
ctcgtggcgttttaccaggcgaacaactgggtgtacctgcgcctcagccgcgacgaggtg
ctcggcaaaagcctcaacatcctcacgtgcgaccacagcgtttatgatgaggcgctcgac
gaggacgtgtccgtcgagggcgccgcgcgcgtctttctcaaggtacgctttgagcgcgag
acgtttcgcttcgcctacgccaccgaaccgggggcgtggcgggaagtcggcccgcgcttc
gacgcgggcaagctctcggacgactactgccaggggctcagctttacggggacctttatc
gggctctgcgcccaagacctgagcgggaggaggcgccatgccgacttcgactacttcagc
taccgcgaagacgcgtga
DBGET
integrated database retrieval system
