Truepera radiovictrix: Trad_2139
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Entry
Trad_2139 CDS
T01254
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
tra
Truepera radiovictrix
Pathway
tra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Trad_2139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tra03400
]
Trad_2139
Enzymes [BR:
tra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Trad_2139
DNA repair and recombination proteins [BR:
tra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Trad_2139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
ADI15252
UniProt:
D7CRS4
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All DBs
Position
2317381..2318259
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AA seq
292 aa
AA seq
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MGLLGAHVPTAGGLANAPTNAAAIGCEAFQLFVKNPNRWAAAALTEADVARFRAAHREHG
SRSAVAHASYLVNLAATNPETLAKSRAALADELRRCDALGVRGLVLHPGAHGGAGTQKGL
DAVARSLDAVLAQTPGDAAVWLENTAGQGTVLGRTPQELGAILARCDHRARIGVCLDTCH
AFAAGYPIHEVAGLAAWLEEVDVQVGLERLGCFHLNDAQCALGSRRDRHANIGAGKMGTE
VFVRLLRDARFTATPMLLETPRGEDKLGHARDLARLRALVNRDAVPMAELTP
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgggccttctaggcgcccacgtccccaccgcagggggattagccaacgcccccaccaac
gccgccgccatcggctgcgaggcgtttcagctcttcgtcaaaaatcccaaccgttgggcg
gctgcggcgctcacagaggccgacgtcgcgcggtttcgggcggcgcaccgcgagcacggg
agccgaagcgccgtcgctcacgcgtcgtacctggtcaacctcgcggccacgaaccccgag
acgctcgccaaatcgcgagctgcgctcgcggacgaactgcggcgctgcgacgcgctcggc
gtccgtgggctcgtgttgcaccccggcgcgcacggcggggcgggtacccaaaagggcctt
gacgccgtcgcgcgctcgctcgacgcggtgctcgcccaaacgccgggggacgcggccgtg
tggctcgagaacaccgccggtcagggcaccgtcctcggccgcacgccgcaggagctgggc
gcgatcctcgcgcgctgcgaccaccgcgcgcgcataggcgtctgcctcgacacctgccac
gcgttcgccgccggttaccccatccacgaggtggcggggctcgcggcgtggctcgaggag
gtagacgtgcaggtcggtttggagcggctcggctgctttcacctcaacgacgcgcagtgc
gccctcggctctcggcgcgaccggcacgccaacatcggggcgggaaagatgggcacggag
gtgttcgtcaggcttttgagggacgcgcgctttacagccacgccgatgctgctcgagacc
ccgcgcggtgaggacaaactagggcacgcccgcgacctcgcgcgcctgcgcgccctcgtg
aaccgggacgcagtgcccatggcggaactcaccccgtga
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