Truepera radiovictrix: Trad_2338
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Entry
Trad_2338 CDS
T01254
Name
(GenBank) type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
tra
Truepera radiovictrix
Brite
KEGG Orthology (KO) [BR:
tra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tra02044
]
Trad_2338
02035 Bacterial motility proteins [BR:
tra02035
]
Trad_2338
Secretion system [BR:
tra02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Trad_2338
Bacterial motility proteins [BR:
tra02035
]
Pilus system
Pilus assembly proteins
Trad_2338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
DUF4388
AAA_29
DUF87
nSTAND3
AAA_16
AAA_23
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADI15448
UniProt:
D7CSM8
LinkDB
All DBs
Position
2543354..2546005
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AA seq
883 aa
AA seq
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MAVLSIGDKRLGAMLLERGFISDEGLQRAIARQAETGGRLSEVLINLGLLSEQRIARAIE
EAMGVPLVHLTRTPTDPQALAKVPAALALELRALPFALQGTRLRVAFEDPLDALAAEELE
DVSGCIVEVFQALGSELTWALATHYPELGLTPPAELNPALGSRVGELALTLGLITREQLE
AALAQQARTGGLLGSILQEQGALSDVQLAELLAQQADLPFTADLRGARISERLASHLLRV
DALQYRAVPYQEEADGLVVALADPRRADDLREIIRTPVRFVVAPESQVQALTDALYEHDK
GRLGETLLQAGKLRREQLREALYEQQKRGRVRPLGDILVDLGFVSREDVQWALAEQRTRG
GRLEDTLVQAGRISPEMLSRSLALQLGYAFVEENVQVDAAAVALVPEGAVRRYNVMPLRV
EGNTLTLAMKDPRHVFAIDDIRLLTGKEIRPAVATEETLIKLINRHYKSNENMEELAKAV
LEEIGDQDEIEDDSHLDDTALVKVVNNIIREAVFNDISDIHIEPYPDKVLVRVRKDGALR
EYMSLPRGVAGAVAARIKIMGRLNIAERRLPQDGRVRFKDKNLEVDLRLSTLPTVYGEKV
VMRLLKRASAIPDIEQLGFADYNFERFTDTIQKPYGIFLITGPTGSGKSFTTFSILKRIA
TPDVNVTTVEDPVEYEIPGINQTQVNVKAGLTFASALRAFLRQDPDVIMIGEIRDTETAK
IAVEAALTGHLVIATLHTNDATGAVTRLAEMGVEPFNISASLLGVLAQRLVRKVCAACRV
AYTPDVDTLRRLGLAPEALQGATLYRGVGCTQCGGSGYNGRHAIHELFTVDAAAQRAIVQ
GRSSSELKELAVAAGMKTLRDDGVFKALAGITTLEEVLARTTD
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
gtggccgtcctgtcaataggcgacaaacgcctcggcgccatgcttttagagcgcggcttt
atcagcgatgaggggttgcaacgcgccatcgcgcgccaggccgaaacgggggggcgcctc
tcggaggtgctcatcaacctggggctcttgtccgagcagcgcatcgcgcgcgccatcgag
gaggcgatgggggtgccgctggtgcacctgacccgcacccccaccgacccccaagcgctc
gccaaggtcccggcggcgctcgctcttgagctgcgcgcgctgcccttcgccctgcagggg
acgcgcctacgggtcgctttcgaggaccctttagacgcgctcgccgccgaggagctcgag
gacgtcagcggctgcatcgtcgaggtctttcaggcgctcggcagcgaactcacctgggcg
ctcgccacccactaccccgaactcggcctcaccccccccgccgaactcaaccccgcgctg
gggtcgcgcgtcggcgagctcgcgctcaccttagggctcatcacccgcgagcagctcgag
gccgcgttagcgcagcaggcgcgtacgggggggcttttgggcagcatcttgcaggagcag
ggggcgctaagcgacgtgcagctcgccgaactgctcgcgcagcaagccgacctgcccttt
accgccgacctgcgcggcgcgcgtatcagcgaacggctcgcctcgcacctgctgcgcgtc
gacgcgctgcagtaccgcgcggtgccctaccaagaggaggcggacggtcttgtcgtggcg
ctcgccgatccgcgccgcgcggacgaccttcgggagattatccgcacccccgtgcgcttc
gtcgtcgccccggagagccaggtgcaggcgctcaccgacgccctttacgaacacgacaag
gggcggctcggcgagacgttgctgcaagcgggcaagctgcggcgcgaacagctgcgcgag
gcgctctacgagcagcaaaagcgcgggcgcgtaaggccgctcggcgacatcttggtcgac
ctcggctttgtcagccgcgaggacgtgcagtgggcgctcgccgagcagcgcacgcgcggg
gggcggctcgaggacaccctcgtgcaagcggggcgcatcagccccgagatgctctcgcgc
agcctcgcgctgcaactcggctacgccttcgtcgaggagaacgtgcaggtcgacgcggcg
gcggtcgcgctcgtccccgagggggcggtgcgccgctacaacgtgatgccgctgcgcgtc
gagggcaacaccctcacgctcgccatgaaagacccgcggcacgtcttcgccatcgacgac
atccggctcctcacgggtaaagagatccgccccgcggtcgctaccgaagagaccctcatt
aagctgatcaaccgccactacaagagcaacgagaacatggaggagctcgccaaggcggtt
ttagaggagatcggcgaccaagacgagattgaagacgactcccacttagacgacaccgcg
ctcgtcaaggtcgtcaacaacatcatccgcgaggcggtcttcaacgacatctcggacatc
cacatcgaaccctaccccgacaaggtgctcgtgcgggtccgcaaagacggcgcgctccgc
gagtacatgtcgttgccgcgcggcgtcgccggcgcggtcgcggcgcgcatcaagatcatg
gggcgccttaatatcgccgagaggcggctgccgcaagacgggcgggtgcgctttaaagac
aagaacctcgaggtcgacctgcgcctctcgacgctgcccacggtctacggcgaaaaggtc
gtgatgcgccttttaaagcgcgcctcggcaattcccgacatcgagcagctcggtttcgcc
gactacaacttcgagcgctttaccgacaccatccaaaagccctacggcatttttctcatc
accgggccgaccggctcgggcaagtcgtttaccaccttctccatcttaaagcgcatcgcc
accccggacgtcaacgtcacgacggtcgaggaccccgtcgagtacgagatcccggggatc
aaccagacgcaggtcaacgtcaaagcggggctcaccttcgcgagcgccctgcgcgcgttt
ttacgccaagacccggacgtgatcatgatcggcgagatccgcgacaccgaaaccgccaag
atcgccgtcgaggcggcgctgaccggccacctggtgatcgccacgctgcacaccaacgac
gccacgggggcggtcacgcggctcgcggagatgggggtcgaaccctttaacatctccgcg
tcgctcttgggggtgctcgcgcagcggctcgtgcgcaaggtgtgcgccgcttgccgcgtc
gcctacacccccgacgtggacaccctgcggcgtttggggctcgcccccgaagcgctccag
ggcgcgacgctctaccgcggcgtcggctgcacgcagtgtggcggcagcggctacaacggc
cgccacgcgatccacgaactgtttaccgtcgacgccgcggcgcagcgcgccatcgtgcag
ggccgctcgtcgagcgaactcaaagagctcgcggtcgctgcggggatgaagacgctgcgc
gacgacggggtgttcaaggcgctcgccggcatcaccacgctcgaagaggtgctcgcgcgc
accaccgactga
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