Truepera radiovictrix: Trad_2360
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Entry
Trad_2360 CDS
T01254
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tra
Truepera radiovictrix
Pathway
tra00061
Fatty acid biosynthesis
tra00071
Fatty acid degradation
tra01100
Metabolic pathways
tra01212
Fatty acid metabolism
tra02024
Quorum sensing
tra04146
Peroxisome
Module
tra_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tra00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Trad_2360
00071 Fatty acid degradation
Trad_2360
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Trad_2360
09145 Cellular community - prokaryotes
02024 Quorum sensing
Trad_2360
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tra01004
]
Trad_2360
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tra04147
]
Trad_2360
Enzymes [BR:
tra01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Trad_2360
Lipid biosynthesis proteins [BR:
tra01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Trad_2360
Exosome [BR:
tra04147
]
Exosomal proteins
Exosomal proteins of breast milk
Trad_2360
Exosomal proteins of breast cancer cells
Trad_2360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADI15469
UniProt:
D7CSP9
LinkDB
All DBs
Position
complement(2577533..2579503)
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AA seq
656 aa
AA seq
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MGVEVIEKTPDKTLPQLLLERAARAPKAVALRHKHFGVWQERTWGEVESEVRRAALGLLS
LGVVPGDRVAVLADNIPEWLLLELAAQSLGAMTVGIYASSSPDEVDYLLSYTEASVLLAE
DQEQVDKVLGLRERLPHLKKVIVEDPRGMRAYLEDPWFITWSELLRLGEALGAREPELFR
AHVAQGNPDDICHLSTTSGTTGRPKAAMLSHRNYLAMATALHQVDPIASGDDYVSYLPFA
WIVEQVFAVALPLLTGMVVNFPEDSETAMSDLKEIGPHMMLGAPRVWEGVQAAIWVKISE
SYTLNRWVYRRLMRVGERAAAYRMRGERLPWGLALAYRLAHALLFRPLKDQLGFLRLRRA
YTGGAALGPDTFTFFQGIGVNLKQVYGQTETAGLAYVQPDGDIRPDTVGVPLPGVEVRIS
EAGEVLTRCAGVCHGYFRRPEAFEETITEDGFFRSGDAGYLDERGHLVIIDRVSDVMHTE
SGHMFSPQAVENKLKFSPFIKEAVVYGGGKPFLTAMINIDPLTVGTWAEERGISYTTYMD
LSQLPAVGELITGEVERANETLRPEERVHRFVLLYKLLDADDEELTRTGKVRRKVIAERY
KALLEALYDPARTRVPVSAEFRYQDGQRVRFETEVTVYAPRAVGSLEPREAVGRSG
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgtagaggtgatcgaaaaaacgcccgacaaaaccctgccgcagcttcttttggag
cgcgcggcgcgcgcgccgaaggccgtagcgctgcgccacaagcacttcggggtgtggcag
gagcgcacctggggggaggtcgaaagcgaggtgcgccgcgccgcgctggggctgctgtcg
ctcggcgtggtgcccggcgaccgcgtcgccgtgctcgccgacaacatccccgagtggttg
ctgctcgagctcgccgcccagagcctaggggcgatgacggtcggtatctacgcctcgagc
tcccccgacgaggtcgactatttgctcagctacaccgaagcgagcgtgttgctcgccgag
gaccaggagcaggtcgacaaggtgctcgggttgcgcgaacgcctgccgcaccttaaaaag
gtcatcgtcgaggacccgcgcgggatgcgcgcctacttagaagacccctggtttatcacc
tggagcgagctcttaaggctcggcgaagcgctcggcgcgcgcgagcccgagctctttcgc
gcgcacgtcgcgcagggcaacccagacgacatctgccacctctcgacgacctcgggcacc
accggccgcccgaaggcggcgatgctcagccaccgcaactacctcgcgatggccacagcg
ctccaccaggtcgacccgatcgcctccggcgacgactacgtgtcgtacctgccctttgcc
tggatcgtcgagcaggtctttgccgttgcgctccccttgctgacggggatggtcgtgaac
ttccccgaagacagcgagacggcgatgagcgaccttaaggagatcggcccccacatgatg
ctcggtgcgccgcgcgtctgggagggggtgcaagccgccatctgggtcaagatcagcgag
tcgtacacgctcaaccgttgggtctaccggcggctcatgcgcgtcggcgagcgcgcggcg
gcctaccgcatgcgcggcgagcgcctgccttgggggctcgcgctcgcctaccgcttggcg
cacgcgctgctcttccggccgctcaaagaccagctcgggtttttgcgcctgcgccgcgcc
tacacggggggggcggcgctcggccccgacaccttcacctttttccaggggatcggggtc
aacctcaagcaggtctacggccagaccgagacggctgggctcgcctacgtccaacccgat
ggcgacatccgccccgacaccgtcggggtgcccctgccgggggtcgaggtgcgcatctcc
gaagcgggggaggtgctcacgcgctgcgccggggtctgccacggctacttccgccgcccc
gaagcgttcgaggagaccatcactgaagacggttttttccgctcgggggacgcgggctac
ctagacgagcgcgggcacctcgtcatcatcgaccgggtgagcgacgtgatgcacaccgag
agcgggcacatgttctcgccgcaggcggtcgagaacaaactcaagttcagcccctttatc
aaggaggcggtggtctacggagggggcaaaccgtttttgaccgccatgatcaacatcgat
ccgctcacggtcggcacctgggccgaagagcgggggatctcctacaccacctatatggac
ctctcgcagctccccgccgtgggcgagctgatcaccggcgaggtcgaacgggccaacgag
acgctccgccctgaggagcgcgtgcaccgctttgtgctcctctacaaactcctcgacgcc
gacgacgaggagctgacccgcaccggcaaggtgcggcgcaaggtgatcgcggagcgttac
aaagcgctcctggaggcgctgtacgacccggcgcggacgcgggtaccggtgagcgcggag
tttcgctaccaagacgggcagcgcgtgcgcttcgagaccgaagtgacggtctacgccccg
cgcgcggtggggagcctcgagccgcgcgaggcggttgggaggagcgggtga
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