Truepera radiovictrix: Trad_2928
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Entry
Trad_2928 CDS
T01254
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tra
Truepera radiovictrix
Pathway
tra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Trad_2928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tra03019
]
Trad_2928
03110 Chaperones and folding catalysts [BR:
tra03110
]
Trad_2928
03029 Mitochondrial biogenesis [BR:
tra03029
]
Trad_2928
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tra04147
]
Trad_2928
Enzymes [BR:
tra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Trad_2928
Messenger RNA biogenesis [BR:
tra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Trad_2928
Chaperones and folding catalysts [BR:
tra03110
]
Heat shock proteins
HSP60 / Chaperonin
Trad_2928
Mitochondrial biogenesis [BR:
tra03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Trad_2928
Exosome [BR:
tra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Trad_2928
Exosomal proteins of other body fluids (saliva and urine)
Trad_2928
Exosomal proteins of breast cancer cells
Trad_2928
Exosomal proteins of colorectal cancer cells
Trad_2928
Exosomal proteins of bladder cancer cells
Trad_2928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADI16023
UniProt:
D7CVW2
LinkDB
All DBs
Position
complement(3187729..3189381)
Genome browser
AA seq
550 aa
AA seq
DB search
MAKDLIFQEEARRSLERGVNAVANAVKVTLGPKGRNVVLEKKFGSPTITKDGVTVAKDIE
LGNGLENIGAKLLIEIASKTNDITGDGTTTATVLGQAIVKEGLRNVAAGANPLALKRGID
KGVEAAVEEIRKMARSVEDSKAVAEVAAISANDREIGQLIAEAMDKVGRDGVITVEESKG
LDTELDVVEGMQFDKGYISPYFITDSDTMEAVLEDAYILIHEKKISALKDLLPVLEQVAQ
TGRPLLIIAEDIEGEALATLVVNKIRGTLNIAAVKAPGFGDRRKEMLKDIAAVTGGTVVS
EELGYKLENTRLDMLGRANRIRISKDETTIIEGKGDQSAIEARVKAIRTEIENTDSDYAR
EKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALSTARSAVEEGIVAGGGVTLIHA
ISAVAEVAKGLEGDERTGALILMRALEEPARQIAANAGAEGSVIVNAIKGKNDGRYGYNA
ETGEFVDDMIEAGIVDPAKVTRTALQNAASIASLLLTTEAVIAERPEKEEPAAAGAGAGG
GMGGMGGMDF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagacctcattttccaagaagaagcgcgccgcagcctcgagcgcggcgtcaac
gcggtagccaacgccgtcaaggtcaccttgggccccaaaggccgcaacgtggtgttggag
aagaagttcggctcgccgaccatcaccaaagacggcgtcacggtcgctaaagacatcgag
ctcggcaacggccttgaaaacatcggtgccaaactcctgatcgagatcgcctcgaagacc
aacgacatcaccggtgacggtaccacgaccgcgacggtgctcggtcaggcgatcgtcaaa
gagggtttgcgcaacgtcgcggcgggcgccaaccccctcgcgctaaagcgcggcatcgac
aaaggcgtcgaggcggcggttgaagagatccgcaaaatggcccgcagcgtcgaggactcg
aaggcggtcgccgaagtcgccgccatttcggccaacgaccgcgagatcggccagctcatc
gccgaagcgatggacaaagtcggccgcgacggcgtgatcaccgttgaggagtccaagggt
ctcgacaccgagctcgacgtcgtcgaggggatgcagttcgacaaggggtacatcagcccc
tacttcatcaccgactccgacaccatggaagcggtgctcgaagacgcctacatcctcatc
cacgagaagaagatctcggcgcttaaagacctcttgccggtgctcgagcaggtcgcccag
accggccgcccgcttttgatcatcgccgaggacatcgaaggcgaggcgctcgcgaccctg
gtcgtcaacaaaatccgcggcaccctgaatatcgccgccgtcaaagcccccggtttcggt
gaccgccgcaaggagatgctcaaagacatcgcggctgtcacgggtggtacggtcgtctcc
gaggagctcggctacaagctcgagaacacccgcctcgacatgctcggccgcgccaaccgc
atccgcatctcgaaggatgaaaccaccatcatcgagggtaagggcgaccagagcgccatc
gaagcgcgcgtcaaggcgatccgcacggagatcgagaacaccgactccgactacgcccgc
gaaaagctgcaggagcgcctcgccaagctcgccggcggcgtcgcggtgatccgcgtcggg
gcggcgaccgaaactgagctcaaggagaaaaagcaccgcttcgaggacgcgctctcgacc
gcgcgttcggccgtggaagagggcatcgtcgccggcggtggggtgacgctcatccacgcg
attagcgccgttgccgaagtcgccaagggcctcgagggcgacgagcgcacgggcgctctg
attctcatgcgcgcgctcgaggagccggctcgccagatcgctgccaacgccggcgccgag
ggcagcgtgatcgtcaacgccatcaagggcaaaaacgacggccgctacggctacaacgcc
gagacgggcgagttcgtcgacgacatgatcgaagcgggtatcgtcgatcccgccaaagtc
acccggacggcgctacagaacgcggcctccatcgcctcgctgctgctgaccaccgaagcg
gtcatcgccgagcgccccgagaaagaggagcccgcagcggccggtgccggcgcgggcggc
ggcatgggcggtatgggcgggatggacttctaa
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