Tardiphaga robiniae: HB776_06530
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Entry
HB776_06530 CDS
T06738
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
trb
Tardiphaga robiniae
Pathway
trb03030
DNA replication
trb03430
Mismatch repair
trb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
trb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HB776_06530 (dnaE)
03430 Mismatch repair
HB776_06530 (dnaE)
03440 Homologous recombination
HB776_06530 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trb03032
]
HB776_06530 (dnaE)
03400 DNA repair and recombination proteins [BR:
trb03400
]
HB776_06530 (dnaE)
Enzymes [BR:
trb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HB776_06530 (dnaE)
DNA replication proteins [BR:
trb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HB776_06530 (dnaE)
DNA repair and recombination proteins [BR:
trb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HB776_06530 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
HHH_3
DUF655
Motif
Other DBs
NCBI-ProteinID:
QND70926
UniProt:
A0A7G6TVZ4
LinkDB
All DBs
Position
1402010..1405492
Genome browser
AA seq
1160 aa
AA seq
DB search
MSQKPAAASNAGFVHLHVHSAYSLLKGSIKIQKLAELAKADHQPALALTDSDNMFGALEF
SEKLVGYGIQPITGCEVAIDFGDQDPNARNALNAVMPRIVLLAAKERGYQSLMKLNSRAF
LETPVNHAPHIKLEWLLEETEDLIALSGGPDGPINQALLADQSALAATRCDRLASLFGDR
LYIELQRHGAEKERRAEAGLIDLAYAKGLPLVATNEPYFAAADDYEAHDALLCIAGGRII
AETDREQLTTDHRFKTRAEMAVLFADIPEALASTVEIAERCSFRPKTRKPILPRFTVGAG
SNAEGAAQEESDELRRQAEEGLRKRLEIHGVSQGKSEEEYHARLDFELNVISRMNYAGYF
LIVSDFIKWAKAQGIPVGPGRGSGAGSLVAWVLTITDLDPLQFNLLFERFLNPERVSMPD
FDIDFCQDRRGEVISYVQQRYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTK
LVPQNPAAPVTLAAAIEGEPKLQALRDEDPIVAKAFDIAQRLEGLTRHASTHAAGIVIGD
RPLSQLVPMYRDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVAVKLLKQRNIDV
NLATTPITDPKSYEMLARGEVVGVFQVESQGMRRALVDMRPDRFEDIIALVALYRPGPMA
NIPTYCARKHGDEEPEYLHPIIEPILKETFGVIIYQEQVMQIAQVMAGYSLGDADLLRRA
MGKKIRAEMEKQREIFVAGSVKNGVPKGQADTIFDLLAKFADYGFNKSHAAAYALVSYHT
AYMKAHYPVEFIAASMTLDMGNTDKLSEFRAEAQRLGIKVEAPNINRSGVTFEVSDNTIY
YALAALKGVGAGAVELIVAERNKNGLFTSLADFASRVSPRAVNKRIIETLAAAGAFDTLD
PHRARVHGGADAILAACQSAHVDTTIGQGNMFGGAADAPTIMLPQIDNWLAAEKLRKEYD
AIGFFLSGHPLDDYATALKRLRVQSWAEFCRAVKTGATAGRVAATVVSRMERRTKTGNKM
GIMGLSDPTGHFEAVLFSEGLAQYRDVLEPGTAVLLQLGAELQGEDVRARVLHAEPLDAA
AAKTQKGLRVTMKDTKALDSLVKRLQPQPSNAAGGGDVSLILRLDLQTEVEFKLEGRFQV
SPQIAGAIKAVSGVEMVETL
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaagcccgccgccgcgtcgaatgccggatttgtccatctgcacgtgcattcg
gcctattcgctgctgaagggctcgatcaagatccagaaactcgcggaactggcgaaggcc
gaccatcagccggcgctggcgctgaccgacagcgacaacatgtttggcgcgctggaattc
tccgagaagctggtgggctacggcatccagccgatcaccggctgcgaggtcgcgatcgat
ttcggcgaccaggatcccaacgcccgtaacgcgctgaacgccgtgatgccgcgcattgtg
ctgctggccgccaaggagcgcggctatcagagcctgatgaaactcaactcgcgcgcgttt
ctggaaaccccggtcaatcacgcgcctcacatcaagctggaatggctgctggaggaaacc
gaagacctaatcgcgttgagcggcggtccggacggtccaatcaatcaggcgctgctcgcc
gatcaatctgcgctggccgctacgcgctgcgaccggctcgcatcgctgttcggcgatcgg
ctctacatcgaactgcagcgtcatggcgccgagaaggagcgccgcgccgaagccggtttg
atagacttggcttacgccaagggcctgccgttggtggcaacgaacgagccgtattttgcc
gccgcggatgactatgaggcccatgatgcgctactatgcatcgccggtggcaggatcatt
gccgagacggaccgcgagcagctcaccaccgatcatcgcttcaagacccgcgccgaaatg
gcagttctgtttgccgacatccccgaggcattggcgtcaaccgtcgaaatcgccgagcgc
tgctcgttccggccaaagacgcgcaagccgatcctgccgcgcttcacggtgggcgccggc
agtaacgccgaaggtgcggcccaggaggaatccgacgagttgcgccgtcaggccgaggag
gggctgcgcaaacgtctcgagatccacggcgtgtcacagggcaagagcgaggaggaatac
cacgctcggctcgacttcgaacttaacgtcatctcccgcatgaactatgcgggttacttc
ctgatcgtgtccgacttcatcaaatgggcgaaggcgcagggcattccggtggggccgggc
cgcggttcgggcgccggttcactggtcgcctgggtcttgaccatcaccgatctcgatccc
ttgcagttcaatcttctgttcgaacgcttcctcaatccggaacgcgtctcgatgccggac
ttcgacatcgacttctgccaggatcgtcgcggcgaggtgatctcctatgtgcagcagcgc
tacggccgcgatcaggtcgcgcagatcatcaccttcggtacgctgcaggcgcgcggcgtg
ttgcgcgacgtcggccgtgtgctgcagatgccctatggccaggtcgacaagctgaccaag
ctggtgccgcaaaatccggccgcaccagtgacacttgcagccgcgatcgagggcgagccg
aaactgcaggcgctccgcgacgaggatccgatcgtcgccaaggcctttgatattgcgcag
cgtctcgagggcctgacgcgccacgcttcgacccacgccgcaggcatagtgattggcgac
cggccgctgtcgcagctcgtgccgatgtatcgcgatccgaagtcggacatgccggtcacc
cagttcaacatgaaatgggttgagcccgcaggtctcgtgaagttcgacttcctcggcctg
aagacgctgacggtgctcgatgtcgccgtgaagctgctcaagcagcgcaatattgacgtc
aatcttgcgaccacgccgattaccgatcccaagagctacgaaatgctggcgcgcggtgaa
gtggtcggcgtattccaggtggaaagccagggtatgcggcgcgcgcttgtggacatgcgg
cccgaccgtttcgaggacatcatcgcgctggtcgcgttgtatcgtccgggcccgatggcg
aacatcccgacctattgcgcgcgcaagcatggcgatgaagagccggaatatctgcatccg
atcatcgagccgatcctgaaggaaaccttcggcgtcatcatctatcaggaacaggtgatg
cagatcgcgcaggtcatggccggctattcgcttggcgacgccgatctgctgcgccgtgcg
atgggcaagaagatccgcgccgaaatggaaaagcagcgcgagatcttcgttgcaggttct
gtcaagaacggcgtgccgaaggggcaggccgatacgatcttcgatctgctggcaaaattc
gccgactatggcttcaacaagagccacgcggcggcctatgcgctggtgtcgtatcacacc
gcctatatgaaggcgcattatccggtggagttcattgcggcgtcgatgacgctcgacatg
ggcaacaccgacaagctgtcggaatttcgcgccgaggcgcagcggctcggtatcaaggtc
gaggcgccgaatatcaatcgttcgggcgtcaccttcgaggtcagcgacaacacgatctat
tatgcgctggccgcgttgaaaggcgtcggcgctggcgccgtcgagctgatcgtcgccgag
cgcaacaagaatggtttgttcacgtcgcttgccgactttgcgtcgcgcgtgagcccacgc
gcggtcaacaagcgcatcatcgaaacactcgctgcggccggcgccttcgatacgctcgat
ccacatcgtgcccgcgtgcatggcggcgcggatgctattttggccgcctgccagagcgcc
cacgtggatacgacaatcggtcagggaaacatgtttggcggcgcggccgatgcgccgacc
atcatgctgccgcagatcgacaactggctggcggcggagaagctgcgcaaggaatacgac
gctattggcttcttcctgtccggccatccgctcgatgactatgcgaccgccctgaagcga
ctgcgggtgcagagttgggccgagttctgccgcgcggtcaaaaccggcgctacggcgggc
agggtggcggctaccgtcgtgtcccgcatggagcggaggaccaaaaccggcaacaaaatg
ggcatcatgggcctgtccgacccgaccggccatttcgaggcggtgctgttctccgaaggg
cttgcccaataccgcgacgtgctggaaccgggtaccgcggtgctgctgcaactcggcgcc
gaactccagggcgaggacgttcgggcccgggttctccacgcggagcctctggatgccgcc
gctgccaagacccagaaggggctcagggtgaccatgaaggacaccaaggcactggattcg
ctggtaaaacgcctccaaccgcagccgagcaatgccgccggcggaggcgacgtctcgctg
atcctgcgcctcgacctgcaaaccgaggtcgaattcaagctcgaaggccggttccaggtg
tccccgcagatcgccggcgccatcaaggcggtttccggggtggaaatggtcgaaacgctt
tga
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