Tardiphaga robiniae: HB776_12165
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Entry
HB776_12165 CDS
T06738
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
trb
Tardiphaga robiniae
Pathway
trb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
trb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HB776_12165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trb02000
]
HB776_12165
Transporters [BR:
trb02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HB776_12165
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
SBP_bac_1
EIF3CL_C
Motif
Other DBs
NCBI-ProteinID:
QND71901
UniProt:
A0A7G6TYR9
LinkDB
All DBs
Position
complement(2544343..2545350)
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AA seq
335 aa
AA seq
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MKPFRLVFALSALALAALSQPARAADVICYNCPPEWADWASMIKAVKTDLSIEMPHDNKN
SGQALAQILAEKANPVGDIGYFGVTFGMKAKAQDALEPYKPAGWDQVDAGLKDSEGYWTT
IHSGTLGFFVNKDALAGKPVPKCWKDLAKPDYKGMVGYLDPTSAAVGYVGAVAVNLALGG
TDQNFDPAIAFFKELKKNDAIVPKQTSYARVVSGEMPILLDYDFNAYRAKYSEKGSFEFV
IPCEGSVVFPYVVGLVKNAPHKDKAKKVMDYLLSDKGQAIWTNAYLRPARKIDLPEAVKA
KFLPDSEYARAKSVDWGKMELAQKGFSDRYLAEVR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccgttccgcttggtatttgctctgtccgcgctggcgctcgccgccctatcgcag
cccgcccgtgctgcggatgtcatctgctacaactgtccgccagaatgggccgactgggcg
tcgatgatcaaggcggtgaagaccgacctcagcatcgagatgccgcatgacaataagaat
tccggccaggcgctggctcagatcctcgccgagaaggctaatccggtcggcgacatcggc
tattttggcgtcactttcggcatgaaggccaaggcgcaggatgcactcgaaccctacaag
cccgctggttgggatcaggtcgatgccggcctgaaggactccgaaggctactggaccaca
atccattccggtacgctcggcttcttcgtcaacaaggatgccctcgctggcaagccggtg
ccgaagtgctggaaggatctcgccaagcccgactacaagggcatggtcggctatctcgat
ccgacgtcggccgccgtcggctatgttggcgctgttgcggtcaatctcgcgctcggcggc
accgaccagaatttcgatccggccatcgccttcttcaaggagctgaagaagaacgacgcg
atcgtgccgaagcagacatcttacgcccgtgttgtctccggcgagatgccgatcctgttg
gattatgatttcaatgcctatcgcgccaagtattccgagaagggcagtttcgaattcgtc
attccctgcgaaggctcggtcgtgtttccctatgtggtcggtctcgtgaagaacgcgccg
cataaggacaaggccaagaaggtcatggactatcttctgtccgacaagggccaggcgatc
tggaccaatgcttacctccgtccggcccgcaagatcgacctgccggaagccgtgaaggcc
aagttcctgccggacagcgaatatgcccgcgccaagagcgtggactggggcaagatggag
ctggcgcagaaaggcttcagcgaccgctatctcgccgaagtccgttga
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