Tardiphaga robiniae: HB776_12235
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Entry
HB776_12235 CDS
T06738
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
trb
Tardiphaga robiniae
Pathway
trb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
trb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HB776_12235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trb02000
]
HB776_12235
Transporters [BR:
trb02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HB776_12235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QND71912
UniProt:
A0A7G6TYT0
LinkDB
All DBs
Position
complement(2555253..2556290)
Genome browser
AA seq
345 aa
AA seq
DB search
MKRALKFTALMLLSTLAIGGQASAQEKLVVSTWGGSFRDLIDEAIAKKFTADTGVKVEYI
TGGTIDRLNQAKLAAAKPESDVTFTTAHVGWLYANDNLFEKLDMAKIPNASHLVEQAKIS
PYHIGSWAYVYTIGYLPEQLPKGVSFESWEGLWNPALKGMISSPDFDPSHVMVVAAKLSG
GDASNWEVGEAKMKALKPNYKAFYTNDANSQQLFATGETPVQVVLSMNAYYMQAQGVPIK
LAIPKEGAVLGVDTMGITKGSTKAELAYKFINTALDPDVQAKIAELKKGSPVVDNAKVKP
EIAALPGVFTTADQWAKQTLVIDAKLRAEKTGTWRKWFTENIMAP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgccttgaagtttactgcattgatgttgctgtcgacgctcgcgattggcggg
caggcatccgcccaggagaagctggtagtcagcacctggggtggaagtttccgcgatctg
atcgatgaagcaatcgccaagaaattcaccgccgacaccggcgtgaaggtcgaatacatc
accggcggcacgatcgaccgtctcaatcaggccaagctcgctgctgccaagcccgagagc
gacgtcaccttcacgacggcccatgtcggctggctctatgccaacgacaatctgttcgag
aagctcgacatggcgaagattccgaacgcgagccatctggtcgagcaggccaagatcagc
ccgtatcacatcggctcctgggcctatgtctacaccatcggctatctgcccgaacagttg
cccaagggtgtcagcttcgaaagctgggaaggtctgtggaatcccgcgctcaagggcatg
atctcatcgcccgatttcgatccgagccatgtgatggtggttgcggccaaactctctggc
ggcgatgcatcgaattgggaagtcggcgaagccaagatgaaggcgctgaagccgaactac
aaggcgttctacaccaatgacgccaacagtcagcagctcttcgccaccggcgaaactccg
gtgcaggtcgtgctgtcaatgaacgcctattacatgcaggcccagggcgtaccgatcaag
ctggcgattccgaaggaaggcgccgtgctcggcgtcgacaccatgggcatcaccaagggg
tcgaccaaggcggagctggcctacaagttcatcaacaccgcgctcgatccggatgtgcag
gcgaagatcgccgaactgaagaagggcagcccggtggtggacaacgccaaggtcaagccc
gagatcgcagcactgccgggcgtgttcacgaccgcggatcagtgggcgaagcagacgctg
gtgatcgacgccaagctgcgtgccgagaagaccggtacctggcgcaagtggttcaccgaa
aacatcatggctccgtaa
DBGET
integrated database retrieval system
