Tardiphaga robiniae: HB776_17805
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Entry
HB776_17805 CDS
T06738
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
trb
Tardiphaga robiniae
Brite
KEGG Orthology (KO) [BR:
trb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trb03000
]
HB776_17805
Transcription factors [BR:
trb03000
]
Prokaryotic type
Helix-turn-helix
IclR family
HB776_17805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
SGL
HTH_IclR
MarR_2
HTH_24
TrmB
HTH_Crp_2
HTH_20
HTH_7
Rrf2
MarR
DUF7343
Dimerisation
HTH_3
dnstrm_HI1420
Xre-like-HTH
HTH_23
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QND72863
UniProt:
A0A7G6U1I1
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Position
complement(3710247..3711893)
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AA seq
548 aa
AA seq
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MNELQWSSDLISPKNVVGTALISKACDILEVIGRAPGSVGQAELADRTGIPRATLYRILA
ALISRGLVRLDPLSENYTLGFNFLELAQNAWSSSDLASIASVELRRLRDLTGETSYLAVQ
EGNHVLALGRFESAHDKRSDAKLGVLKPMHCTSQGKAMLSHLSEAQRDHVLTSQLIAFTE
NTITDTEQLKAHLAIVRSRGYAIDDEEIVLGTRCVGAAILDPEGKPIAAISVAGPTFRMH
PERAEQLGKELIEAAKRISSQLAPTLRAHARHSGDCKVWTKNPAFIGSSPRWDVRAQSIV
WADLLAPSIRIGGHVEEFASLHALSESISSLCLTKNGFICAAGSDILSGDRSGIRKRFAG
SPDIKMRSLRASPNGQIWAAGFEAEANVTKIGPWSKEKGLEHLFDLQGEVGDIAFVGERG
LMVAQPVRQCIYLLELDTRRKRKFADIPKVAGSPCALAIDEKLNPWVGLSDGWSIIKLDD
NGEIERTIALPIPNPTGIAFGGANLCEIFITSARSGLSRDSLTNAPLSGQLLSIEVGERG
LPEALGRL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaattgcagtggtcttccgatttgatttcgccgaaaaatgtcgtgggaacggcc
ttgatcagcaaggcttgtgatatcctcgaagttatcgggcgcgccccgggatcggtaggg
caggcggagctggcggataggaccggcatcccgcgcgcaaccttgtatcggatcctcgcg
gctctgatttcgcgcgggctggtgagactggatccgctcagcgagaactacactctcggc
ttcaacttcttggaactcgcccaaaatgcctggtcgtcgtccgacttagcctccatcgcc
tcggtcgaactgaggcgactgcgtgacttgaccggcgaaacctcctacctcgccgtccaa
gaaggcaaccatgttctcgccttgggacgcttcgaaagcgcacatgacaaacgatccgat
gcgaagctcggcgtgttgaagccgatgcactgcaccagccagggcaaggcaatgctgtcg
catttgtcggaagctcaacgtgatcatgtcctgacttcgcaactcatcgccttcaccgag
aatacgattacagacaccgaacagctgaaggcgcatctggcgattgtgcggtcacgtggc
tacgctatcgacgacgaggagatcgttctcggcacccggtgtgtcggtgcagctatcctt
gacccagaaggcaagccgatagccgcgatcagcgtcgctggcccaactttccgcatgcat
ccagagcgggcggagcagctgggcaaggagttgatagaagctgcaaagcgcatttcaagc
caacttgcgccaacgctcagagcacacgctcggcattccggcgattgtaaggtctggacc
aaaaatcctgcctttatcggctcctcaccgcgctgggacgtaagggcccaatcgattgtt
tgggcagatcttctggctccttcgattcgcatcggtgggcatgtagaggagtttgcctcg
ctacacgctctgtcggaaagcatcagttcactttgccttacgaagaacggtttcatctgc
gctgccggaagcgacattctgtccggagatcgtagcggcatccgcaagcgtttcgctgga
tcgccggatatcaaaatgcgatcgctgcgtgcaagcccgaacggtcagatctgggcggcg
ggtttcgaggccgaagcgaatgtcaccaagatcggtccgtggagcaaggaaaaaggcctt
gagcatttgttcgacctgcaaggtgaggttggcgatatcgctttcgtgggggagcggggg
ctgatggtcgcgcaacccgtgcggcagtgcatttacctgcttgaactcgatacgcgccgg
aagcgcaagtttgccgatatccccaaggtcgccggatctccctgcgcgttagcgatcgat
gaaaagctcaatccttgggtcgggctctctgacggctggagcattatcaagctcgacgat
aacggcgagatcgagcggacaattgcacttcccattcccaatccaacggggattgcattc
ggaggagccaatctttgcgaaatcttcattacgagtgcgcgaagcggcctctcgcgagat
agcttaacgaacgcgccgctgtcggggcaattgctgtcgatagaggtcggcgagcgcggc
ctgcctgaggcattgggaagactataa
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