Tardiphaga robiniae: HB776_22740
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Entry
HB776_22740 CDS
T06738
Name
(GenBank) cadherin-like domain-containing protein
Organism
trb
Tardiphaga robiniae
Pathway
trb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
trb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HB776_22740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_5
Cadherin_4
Big_9
FecR
Cadherin_3
Peptidase_M10_C
IG_AIR9
HemolysinCabind
SCAB-Ig
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
QND73704
UniProt:
A0A7G6U3X2
LinkDB
All DBs
Position
4755137..4759681
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AA seq
1514 aa
AA seq
DB search
MNYAGPFDFSQSGDAPAEPTAGGGSIGHTFSAHTAGSAIVVQDANLLFSGDYKRSGVDLV
LSKDGHEHVVSDYFKGSLRAALSSPDGAQLSGDLVTALVGEVQVAQLGGGATAAAQVIGT
VSKLAGSATAIRNGVSVMLNVGDQVQKGDVVQAGADSSLTMTFIDGTVFGLSANARMVLN
EMVYDPQGSANSSLLSLVQGTITFVAGETAKHGNMRVDTPVATMGIRGTAVLVEIGFEVP
GQGGAPPVKFQVLVEPNGVTGSYVLYSKTSGQAIGTVNAAGQVTSVLGNGDTSTGIADPL
TPIARAIIEQTLQTYFPNYVPNANPRSGPGGGSSPGDPNSGTSPDPLKFIIPDFLPNQPY
TVPIKLQGDGSNTSPIDVTFTRFNTAPIITVTPVVVTLPVNQNSFDIRDQVQINDPDIGD
VATPYVAGTARIISASGPSGTPAALDLKTLIVVDPATGHVSYNPAAFTFLGAGQQAVYTI
GFDSQSGPDTTHETLTFTVDGSNDAPVVASALTAAATQSTAAQSFDLLAGASDADLGETA
TLTVSGVKFSLNNGAPTNTHVGVTLNGTTLEIAPNAFAYLGEGQTATLRVTYNIIDAHGA
SVAQTETITITGVNDAPVITGSSIAVVLGGVTVLSDTSFTVSDPDGTTDFTFTVTNVTGG
TFEVWDGTDWVPAVPMSQRVSTESTNSEISYTFTSNQLAQHHVRFVSDGITSQPTFTVQV
DDRGSHNNLSAPYEGTVAPSENHAPAVGSDVTLAAIEEDGSLTITEAQLLANATDADGQT
LQVTCLEVANGCGTLTANENGTWTFTPAANFNGPVSFTYRISDGVTSVDGHAALDVTPIN
DLPSGKVTISGTFQEGATITAETGSVADVDGLGTFHYQWYRSSPGSNGPVAISQATGSSY
VLTSADVGVTVYVIVSYTDGGGTAELIASGPTDVIIAAPPPYGASNYWTGAVNNDWNTPG
NWSLGIVPTADEIVYINTVAPPAVTFNLNGQLEIAGLHIGAQAELDLTGTGTLNVTGTLV
NDGDIQLTPGTTLEVHGVVQNTGTLLVDDHTAGATLLIHGTVTLDGEGTVTLDGSADRIT
GDSLSSKLINADNTINGYGKLGDGKLSIVNECDGKIIASDCSHALIIDTGKGSLINFGLI
ASMATGGLEIKGDLVNYGTIEAYAGLFEIGGDVTGHGTAKISGGNLEFGGWSDANVTFSG
VSSDELILDRGSHFVGTVSGLSYGDTIDLKGISPWQLWFDQHDGVVDVHYGWGKNDYFTL
TDPGVLKHLDIDSDHHGGTEMTWSNDAPDINTSSAELSKLHGGYFKISDVSVWDKDWSSG
ENYKLDINGTVVKSGSLSSIDHYLEDGFTFKPTSSETPQATVALTVTDGFGASEHVNFIF
NTAPLQSNTQVSLNGTTGNDVIFATVNKDTLTGGHGSDQFVFGSHSGSIDRDIVTDFEVG
TDKIVLDHIRGVPNLSGPFGDLKLTLWELSGGIEQKGNNTLIHLDGGDTLQLNNVHMSQL
HASDFIVHPYSNVA
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
ttgaactacgcgggtccattcgatttttcgcaatctggcgatgctccggccgaaccaacg
gctggcggcggcagtattggccatacgttttccgctcatacggccggttccgcgattgtc
gtgcaggatgccaacctgctgttctccggcgactacaagcgctccggcgtcgatctcgtg
ctgtccaaggacgggcacgaacacgtcgtctccgactatttcaagggttcgctgcgcgca
gctctgtcgtcgcccgatggcgcgcaactgtccggcgacctcgtcaccgcccttgttggt
gaagtgcaggtcgcgcagctcggcggcggcgccactgccgccgcgcaagtcattggtact
gttagcaagctagccggtagcgcgactgcgatccgcaatggcgtctccgtgatgctcaat
gtcggcgatcaggtgcagaagggcgacgtggtccaggctggcgcagactcatcgctgacc
atgactttcatcgatggcaccgtgtttggcctctcggccaatgcacgcatggtgctgaac
gagatggtctacgatccccagggatcggcgaactcatccttgctcagcctcgtgcagggc
acgatcactttcgttgccggcgaaactgccaagcatggcaacatgcgcgtcgatacgccc
gttgccaccatgggcattcgcggcaccgccgtgctggtcgaaatcggtttcgaggtgccc
ggacagggcggcgcaccgccggtgaaattccaggttctggtcgagcccaacggcgtgacc
ggctcttatgtgctgtatagcaagaccagcggccaggcgatcggcaccgtcaatgcggcc
ggtcaggtcaccagcgtgctcggcaatggcgatacatccacaggcatcgccgatccgctg
acgccgatcgcacgggcgatcattgagcaaacgctgcagacctatttcccgaactacgtt
ccgaacgccaatccgcgcagcggacccggcggcggttcatctccgggcgatcctaattcc
ggcaccagtccggatcccttgaaattcattattccggattttctgccgaaccagccctac
accgtcccgatcaagctgcagggcgacggctccaacacgtcgccgatcgacgtcaccttc
acgcgcttcaacaccgcaccgatcatcacggtgacgcccgtcgtcgtcacgctgccggtc
aaccagaacagtttcgatatcagggaccaggtccagatcaacgatccagacattggtgac
gtggcaacgccctatgtggcgggcaccgcgcgcatcatttcggcgagcgggccaagcggc
acgccggccgcactcgatctcaagacgctcatcgtggtcgatccggcaaccggccatgtc
tcctataatcccgccgctttcacgttccttggcgcaggacagcaagccgtctacaccatc
ggcttcgacagccagtccgggccggacacaacccatgagacgctgaccttcacggtcgat
ggctccaatgatgcgccggtcgttgcatctgcgctgacagccgccgcaacgcagagcact
gccgcccagagcttcgatttgctcgccggcgcgtccgacgccgatctcggcgaaaccgcg
acgttgaccgtgagtggtgtgaaattttcactgaacaatggtgcgccgaccaacacgcat
gtcggcgtgacgctcaacggcaccacgctggaaatcgctccgaacgcatttgcctatctc
ggcgaaggccagaccgcgaccctcagggtcacctataatatcatcgatgcgcatggcgcg
agcgtggcgcagaccgagacgattacgatcacgggcgtcaacgacgcgccggtgatcacc
ggctcgtcgatcgcggtcgtcctcggcggcgttacggtgctgagcgatacaagcttcacg
gtcagcgatcccgacggaacgaccgacttcactttcacggtgaccaacgttaccggcggc
acattcgaagtgtgggacggcaccgactgggtgccggctgtgcccatgtcgcagagagtt
agcacagagtcgaccaactcggagatttcctacaccttcacaagcaaccaactcgcccag
catcatgtccgcttcgtcagtgatggcatcacgagccagcccactttcacggtgcaggtc
gacgataggggcagccacaacaatctcagcgccccctatgagggcacagtcgcgcccagt
gagaaccacgcaccagcagtcggcagcgatgtgacgctcgcagctatcgaggaagacggc
agcctgaccatcacagaggcgcagctgctggcgaacgccacggatgccgacggccagacg
ctgcaagtgacctgtcttgaagtcgcgaacggctgcggcacgctcactgcaaacgaaaac
ggcacctggaccttcacgcccgcagccaatttcaacggacccgtgtcgtttacgtatcga
atctccgacggcgtgacgtcggttgatggccatgcggcgctcgacgtcacgccgatcaat
gatttgcccagcggaaaggtcacgatctccggaaccttccaggaaggcgcgacgatcacc
gccgagaccggcagcgtggccgatgtcgatgggctggggacgtttcactatcaatggtac
cgctcaagccccggctccaatggacctgtcgcgatttcgcaagccacgggcagcagctac
gtcctcacatccgcggatgtcggcgtgaccgtctatgttatcgtcagctacaccgacggc
ggtggaaccgccgaactgattgccagtggcccaaccgatgtgatcatcgctgcaccgccg
ccctacggagcgtccaactactggactggcgccgtcaacaatgactggaacacgcctggc
aactggtcgctcgggattgttccgacggcagacgagatcgtttatatcaacacggttgct
ccgcccgcggtcactttcaatctcaatggccagctggaaattgccgggcttcacatcgga
gcccaggccgagctcgatttgaccggcaccggaacgctgaatgtcaccggcacactggtg
aacgacggcgatatccagctcacaccaggcacaacgctcgaagtccatggcgtcgtacaa
aacaccggcacgctgctggtcgatgatcacacggccggcgcgaccctgctgatccacggt
acggtcacgctcgatggcgaaggcaccgtgacgctcgacggaagcgccgaccggatcacc
ggtgactcgctcagctcgaaactcatcaatgccgacaatacgatcaacggctacggcaag
ctcggcgacggcaagctcagcatcgtcaatgaatgcgacggcaagatcatcgcatccgac
tgctcgcacgcactgattatcgacaccggcaagggtagcctgatcaactttggtttgatc
gcgtcgatggccaccggcggtctcgaaatcaaaggcgatctggtcaattacgggaccatc
gaagcctatgccggcctgttcgagatcggcggcgatgtcaccggtcacggcaccgcgaaa
atcagcggcggcaatctcgaattcggcggctggtcggatgccaatgtgacattctccggc
gtcagcagcgacgagttaatcctcgatcgcggctctcacttcgtcgggactgtctctggt
ctgtcctatggcgacacgatcgacctgaagggtatctcgccctggcagctctggttcgac
cagcacgacggcgtcgtcgatgtgcattacggctggggcaagaatgactatttcacgctg
accgatccaggcgtgctgaaacatctcgacatcgactccgaccatcacggtggcaccgag
atgacctggagcaatgacgcgcccgacatcaatacgtcgtcggctgagctttccaagctc
cacggcggctatttcaagatttccgacgtgtccgtgtgggacaaagattggtccagcggt
gagaactataagctggacatcaacggcactgtggtgaagtcgggatcactctcgtctatt
gatcattatctcgaagatggtttcaccttcaaaccaaccagttcggaaacgcctcaagcg
accgttgccctcaccgtcactgacggattcggcgctagcgaacatgtcaatttcatcttc
aatacagcacctctccagtccaatacgcaggtgtcactgaacggcacgaccggaaatgac
gttatcttcgcaacggtcaacaaagatacgctgacgggtggccatggctcggatcaattc
gtcttcgggtcgcatagtggatcgatcgatagggatatcgtcacggacttcgaggtcggc
accgacaagatcgtgctcgaccacattcgtggtgtgcccaatctttcaggccccttcggc
gatttgaagctgaccctttgggagctgtctggcggaatcgagcagaagggaaacaatacc
ctgatccatctcgatggcggtgacacgctgcaactcaataacgtgcacatgtcccagctg
cacgccagcgacttcatcgtccacccctattccaacgtggcgtaa
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