Tardiphaga robiniae: HB776_23825
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Entry
HB776_23825 CDS
T06738
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
trb
Tardiphaga robiniae
Brite
KEGG Orthology (KO) [BR:
trb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trb03032
]
HB776_23825
03400 DNA repair and recombination proteins [BR:
trb03400
]
HB776_23825
Enzymes [BR:
trb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HB776_23825
DNA replication proteins [BR:
trb03032
]
Prokaryotic type
DNA Topoisomerases
HB776_23825
DNA repair and recombination proteins [BR:
trb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HB776_23825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QND73889
UniProt:
A0A7G6U4F7
LinkDB
All DBs
Position
complement(4981276..4982382)
Genome browser
AA seq
368 aa
AA seq
DB search
MMEQQNFAPSRAVSARSVARSARMVKPSPASVEVLAREMGLKLGDQSELTIRRLKRGKSY
SFVRANGTPIKHIGTIKRLNSMAVPPAYAEVRYAADPTSHLQAVGRDAAGRLQYRYHSDW
EKVREQRKAHRLAKLVAALPKIRRNVSALLAGDEPTREFALAAVIELVTRTAIRAGNESY
MKLSGTRGATTLMKSNVQLEDDCIVLTFKAKGGKAVRKESNASKLVRAIGILHDVPGKRL
FQYRDNAGRIHKVNTAAVNAFLRDIAGIKISLKDFRTLMASATVAETLSRIEPAASERGR
RKQVLEAVRSAADELQNTAAICRKSYVHDTIVTAFEDGVLARIAATQTGYRSQSKREQLL
AQVVAEAG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgatggaacagcagaatttcgcgccttcccgggccgtttccgcccgttccgttgcgcgg
tcggcccgtatggtcaagccaagccccgcgagtgtggaggttttggcccgtgaaatgggc
ctgaagcttggagatcagtctgagctgacgatccgccggctcaagcgcggaaaatcttat
tccttcgtcagggccaacggcaccccgatcaagcatatcgggacgatcaagcggctgaac
tccatggcagtgcccccggcctatgccgaggtccgctatgccgctgatcctacgtcgcat
ttgcaggccgtaggccgcgacgcggccggccgcctgcaatatcgctatcactcggattgg
gagaaggtccgcgagcaacgcaaggcgcatcggctggcgaagctggtggcggcactgccg
aagatccgccgcaacgtttcggcgcttctggcaggcgacgagccgacgcgtgagttcgcg
ctcgccgctgtcatcgaactcgtcacgcggaccgcgatccgtgccggcaatgagagctac
atgaagctgtcgggcacccgcggcgccactacgctgatgaagtcgaacgtgcagctcgaa
gacgattgcatcgtgctcaccttcaaggccaagggcggcaaggcagtgcggaaggagtcc
aacgcgtcgaagctcgtccgcgcgattggtatcctgcacgacgtgccgggcaaacgcctg
ttccagtatcgcgacaatgctggccgcattcacaaggtcaacacggcagcagtgaacgcc
ttcctgcgcgatatcgccggcatcaagatttcactgaaggatttccgcactctgatggcg
tcggcgacggtggctgaaaccctgtcacggatagagccggcagccagtgagcgcggacgc
aggaagcaggtgctcgaagccgtgcggtcggcggcggacgaattgcagaacacggcggcg
atctgccgcaagagctatgtgcacgataccatcgtcaccgccttcgaggacggcgtcctc
gcgcgcatcgccgcgacgcaaacgggctatcgctcgcaatcgaagcgcgagcagcttctg
gcgcaggtggtggctgaggcggggtag
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