Tardiphaga robiniae: HB776_24760
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Entry
HB776_24760 CDS
T06738
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
trb
Tardiphaga robiniae
Brite
KEGG Orthology (KO) [BR:
trb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trb03400
]
HB776_24760 (addB)
Enzymes [BR:
trb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HB776_24760 (addB)
DNA repair and recombination proteins [BR:
trb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HB776_24760 (addB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QND74049
UniProt:
A0A7G6U4W7
LinkDB
All DBs
Position
complement(5165880..5169071)
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AA seq
1063 aa
AA seq
DB search
MRVFNIPSSAPFLRTLITALVDGDLVEGFSARGAPEKLAEVTLYLPTRRAGRMAQEIFLD
VLGTHAVLLPRIVPLGDVDEEELAFAQAASPEALERLDAPPALDGLQRRLLLAQLIAAWA
KQLAPGDPTQTPLVVGGPASTLALADDLARLMDDMATRKVDWSALDGLVPDALDQYWQLT
LQFLSIAKDVWPGILDAHDAIEPAVRRDLLIDAEAARLKAHKGGPIIAAGSTGSMPTTAK
FLREVAQLPDGAVVLPGLDTDLDDIAWNLIGGTKDALGRTESSASNHPQFALHALLERFG
ITRRDVTTLGTPSPQGRELLASEAMRPSNATAQWHTRLAQPAVEQKIAAGMQNLAVIAAA
NPEMEALAIAIAMREAHEFKKSAALVTPDRALARRVMAALGRWNLVFDDSGGDALTETSA
GIFARLVAEAAAEQLEPATLLALLKHPLFRLGAAPNAWKDAIETLELALLRGTRPTPGTA
GLAQDFTRFRDELGKLRRREASMLHGAEPCAKLDDDRLDRAEELIAGLRTALAPLEGIHP
IRPIDFAEVALRHREAIKLLSRDDRGNDVALVGREGTALTKAFDDLVVMETVATESGDEE
RLRPSGLMMQLRDYPDVFQTAFADRIVRRPEVANASLRIYGQLEARLTQSDRVILGGLVE
GIWPPSPRIDPWLSRPMRHQLGLDLPERRIGLTAHDFVQLLGTEDVILSHAAKVGGAPAV
ASRFLHRLEAVAGETRWDAALAAGEHYVRYAEELDKPETVTPIAQPEPRPPRAARPLRLS
VTAIEDWLRDPYTIYAKYILGLAPLDPIDMPLSAADRGSAIHASLGDFTMEYSKTLPDDP
ARELRRIGDRHFAPLMARPEARALWWPRFLRIASWFGAWEIDRRINVASIDAEVRGEIKI
PLDHGRVFHLSARADRIEHRSDRTFALLDYKTGQPPTGKQVRMGLSPQLTLEAAILREGG
FAGIAAGSSVSELVYVRLSGNNPPGEERLLELKVERKDEPQLPDDAAIEARAKLEALIRS
FEDEATAYTSLSLSMWSNRYGSYDDLARIKEWSANGGSGGGES
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcttcaacattccatcctctgcgccgttcctgcgcacgctgatcaccgcgctt
gtcgacggtgatctcgtcgagggattttccgcgcgcggcgcgccggagaaactggctgaa
gtcaccctgtatctgccgacacgccgcgccggacgcatggcgcaggagatattcctcgac
gtcctcggcactcatgccgtgctgctgccgcgtatcgttccgctcggagatgtcgacgag
gaagaactggccttcgcgcaggcagcatcgcctgaggcgctcgaaaggctcgatgcacct
cccgcgctcgacggattgcagcgccggcttctgctggcgcaactgattgccgcatgggcg
aagcaacttgcaccgggcgatcccacgcagacaccgctcgtggtcggtggccctgcctcc
acgctcgctctggccgacgatctggcgcggctgatggacgacatggcgacgcgcaaggtc
gactggagcgcgctggacgggctggtgcccgatgcgctcgatcaatattggcaattgacg
ctgcagtttctgagcattgccaaggatgtctggccgggcatcctcgatgcgcatgatgcg
atcgaacctgcggtgcgtcgcgatctcctgatcgacgcggaagcggcgcgcctgaaagcg
cacaaaggcggtccgatcattgccgccggctcgaccggctcgatgccgaccaccgcaaaa
ttcctgcgcgaagtcgcgcaattgcctgatggcgccgtcgtgctgccgggcctcgatacc
gacctcgacgacatcgcatggaatctcatcggcggcaccaaggatgcactcggccggacc
gaatcctcggcatcgaaccatccgcaattcgcgctgcatgcgctgctggagcgcttcggc
atcacgcgccgcgatgtgacgacgctcggcacgccgtcgccgcagggccgcgaattgctg
gcctcggaggcgatgcggccatccaatgccacggcgcagtggcatacgcgtctcgctcag
ccggccgtcgaacagaaaatcgcggccggcatgcagaaccttgctgtgatcgccgccgca
aatccggaaatggaagcgctggccatcgcgatcgccatgcgcgaagcccatgaattcaag
aagtccgccgcgctggtgacgcccgaccgcgcactggcgcgccgggtgatggccgcgctg
ggccgctggaatctcgtcttcgacgattccggcggcgatgcgctgaccgagacctcggcc
ggcatcttcgcgcgcctcgtcgccgaggccgcagcggagcagctcgaaccggcgacattg
ctggcgctgctgaaacatccgctgtttcgtctgggcgcggcgccgaacgcctggaaagac
gcgatcgagacgctcgaactcgcgctgctgcgcggcacgcggccgacgcccggcaccgcc
ggactggcgcaggacttcacgcgcttccgcgacgagctcggaaagctccgacgccgcgaa
gcgtcgatgctgcatggcgcggagccgtgcgcaaaactcgacgacgaccgtcttgaccgc
gcggaagaactgatcgccggattgcgcaccgcgctggcgccgctggaaggcatccacccc
atcaggccgatcgatttcgctgaagttgccttgcggcatcgtgaggcgatcaagctcttg
tcgcgcgacgacaggggcaacgatgtcgcgcttgtggggcgcgaaggaacagcgctcacc
aaggcgttcgacgatctcgtcgtcatggagactgtcgcgaccgagagcggcgacgaggag
cggctgcgtcccagcgggctgatgatgcagctccgcgattatcccgatgtgtttcagacc
gccttcgctgaccgcatcgtgcgccggcccgaagtcgccaatgccagcttgcgcatctat
ggccagctcgaagcgcggctgacgcaatcggaccgcgtgatcctcggcggcctcgtcgaa
ggcatctggccgccgtcgccgcgcatcgatccctggctgagccgcccgatgcgacatcag
ctcgggctcgatcttccggaacgccgtatcggcctcaccgcgcatgacttcgtgcaattg
ctcggcaccgaggacgtcatcctgagccacgccgcgaaagttggcggcgcgccggccgtc
gcgtcgcgctttctgcacaggctcgaagctgtcgccggcgagacccgctgggacgcggcg
ctggccgcgggcgagcactatgttcgctatgccgaagagctcgataaacccgagaccgtc
acgccgattgcccagccggagccgcggccgccgcgtgctgcacgtccgctcaggctgtcg
gtcaccgccatcgaggactggctgcgcgatccctatacgatctatgccaaatatattctg
ggcctggcgccgctcgatcccatcgacatgccgctctcggcagccgaccggggatcggcg
attcacgcgtcgctcggcgatttcacgatggagtacagcaagacactgccggacgatccc
gcgcgcgagctgcgcagaatcggcgatcgacattttgcgcccctgatggcgcgacctgag
gcgcgcgcattgtggtggccgcgtttcctgcgcatcgcttcgtggtttggcgcctgggaa
atcgaccgccgcatcaatgtcgccagcatcgacgcggaagtgcgcggcgagatcaagatc
ccgctcgatcacggccgcgtcttccatctctcggcgcgggccgaccgcatcgagcatcgc
agcgaccgcactttcgcgctgctcgattacaagaccggccaaccgcccaccggcaagcag
gtgcgcatgggcttgtcgccgcagctcacgctggaagccgcgatcctgcgcgagggtgga
tttgccggcattgccgcgggatcgtccgtcagcgaactggtgtatgtccgcctcagcggc
aacaacccgcccggcgaagagcggctgctggaactgaaggtcgagcgcaaggacgagccg
caactgcctgatgacgctgcgatcgaagcgcgcgccaagctggaagcgctgatccgcagc
ttcgaggacgaagccaccgcctatacgtcgctcagcctgtccatgtggtcgaaccgctat
ggcagttatgacgatctggcgcggatcaaggagtggtcggccaatggtggctctggggga
ggcgagtcatga
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