Treponema rectale: DYE49_06525
Help
Entry
DYE49_06525 CDS
T06877
Name
(GenBank) ATP-dependent helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
trc
Treponema rectale
Pathway
trc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DYE49_06525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trc03019
]
DYE49_06525
Enzymes [BR:
trc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DYE49_06525
Messenger RNA biogenesis [BR:
trc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DYE49_06525
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF4391
ERCC3_RAD25_C
AAA_19
Kizuna_M
DUF6201
MGAT4_cons
UTP20_C
Motif
Other DBs
NCBI-ProteinID:
QOS40130
UniProt:
A0A840SBK0
LinkDB
All DBs
Position
complement(1481240..1482832)
Genome browser
AA seq
530 aa
AA seq
DB search
MKFSEFTLNENLQKGIDGAGYVDCTPVQEQVLNASQQGRDLYVQSQTGTGKTAAFLISVI
NEMLTRTDLAARKALIMVPTRELAVQVEEECVKLSKDTGLTCASFYGGVGYDRQVALLKK
GVDIIIGTPGRVIDLHEGNQMNLSDIGFLVIDEADRMFDMGFYPELSRLIKVLPSSERRQ
TMLFSATLNINVKNLAWEYTRNPAEITIEAQNITVDEIDQVLYHVSSDDKMKLLLGIISR
ENPESLIIFSNTKKSCEIIAKRLRMNSIEAEFIIGDLPQKKRLAIMDSFKAGKTKCLVAT
DVAARGIDVNDLAMVINYDLPNEAENYVHRIGRTARAGKSGKAYTFCSEQDVYSLPAIER
YIEKQIPSQVADSSLMVEDKSAGTYIKLDSYHEDYNDKSEFGKRRQREYEKSGRSRNRGN
DRSKGTRGSGRYSARNDDARKEYKRDRRVFSEEETAALASMTTEERMKLYKEKFGKASYS
SARTSGKKKGGNYKKNGAARKSSEKTVLKPVKKTERKGLFGRIKSFFSKK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagtgaatttacgttgaatgaaaatctccagaaggggattgacggtgccggt
tatgttgattgtactccggtacaggaacaggttcttaatgccagtcagcaggggcgggat
ctgtatgttcagagccagactggaactggaaaaacagcggcttttcttatttcggttatc
aatgaaatgctgacgagaacggatcttgctgccagaaaagcgcttatcatggttcctaca
agggaacttgcagttcaggtggaagaggaatgtgtaaagctttcaaaagatacaggcctt
acatgtgcaagtttttacggtggtgtcggttatgacaggcaggtagcacttcttaaaaaa
ggtgtggatattatcataggaactcctggtcgtgtcatagacctccatgaaggtaatcag
atgaatctgtctgatataggttttctcgttattgatgaagctgaccgtatgtttgacatg
ggattttatcctgaactcagcaggcttataaaggttcttccttcaagtgaaagaagacag
accatgctgttttcggctaccctgaacattaatgtaaagaatcttgcgtgggaatatacc
agaaatcctgcagaaattaccattgaggctcagaatatcactgtagatgagatagatcag
gtgctttatcacgtttccagtgatgataagatgaagcttcttcttggaataatttccaga
gaaaatcctgaaagtcttattattttcagtaatactaaaaaatcctgtgaaatcattgca
aagcgcctgcgcatgaattccattgaagcagagtttattattggtgatcttcctcagaaa
aagcgtctggccattatggattcgtttaaggccggaaagacaaaatgtcttgttgctact
gatgtagcagcccgtggaattgatgtaaatgatcttgcaatggttattaattatgatctt
ccgaatgaagctgaaaattatgtacatcgaatcggacgtacagcccgtgccggaaaatca
ggaaaggcatatactttctgcagtgaacaggatgtttattctcttcctgccattgagcgt
tatattgaaaagcagattccttcccaggtagctgattcatctcttatggttgaagataaa
agtgccggaacttatataaagcttgattcatatcatgaagactataatgataaaagcgag
tttggaaagagacggcagcgggaatatgaaaaaagcggaagaagccgtaaccgcggtaat
gaccgttctaagggaaccaggggaagcggccgttattcagccagaaatgatgatgccaga
aaagaatataaacgggacaggcgtgtatttagtgaagaagaaactgcagctcttgcttct
atgactacggaagaaagaatgaaactgtacaaagaaaaatttggaaaagcatcatattct
tctgcccgtacttcaggtaaaaagaagggcggaaactataaaaagaatggcgctgcaagg
aaatcttcagagaaaactgttttgaagcctgtaaaaaagacagaaagaaaaggtcttttt
ggcagaatcaaatctttcttttcaaaaaaataa
DBGET
integrated database retrieval system
