Thermocrinis ruber: THERU_00380
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Entry
THERU_00380 CDS
T03001
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
trd
Thermocrinis ruber
Brite
KEGG Orthology (KO) [BR:
trd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
trd03016
]
THERU_00380
Transfer RNA biogenesis [BR:
trd03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
THERU_00380
Prokaryotic type
Methyltransferases
THERU_00380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
AIG1
Dynamin_N
GTP_EFTU
RsgA_GTPase
MMR_HSR1_Xtn
Ras
CCDC90-like
Roc
DUF1978
Motif
Other DBs
NCBI-ProteinID:
AHE95362
UniProt:
W0DDP9
LinkDB
All DBs
Position
complement(63086..64426)
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AA seq
446 aa
AA seq
DB search
MKQREPIVAIATPYGESAIGVVRLSGLGVLEKVLPFVELKGKLKPRYAHFVKVLDAEGNP
IDEGIMIYYQSPKSYTGEDMVELFLHGNPLILKKVVELFLQNGVRLAERGEFTKRAFLNG
KMDLLQAEAVGDLISAKSELALKSALRQLRGDLSQLIVPLREKILNLCAFVEASIEFEEQ
DIPTLSEEEIKSQLEEIKTKIEELLATVRTGEFLRKGVNLAIVGKPNVGKSSLFNKLLGT
QRAIVTDIPGTTRDFLQEPLNLEGIPINLIDTAGIRHSEDPVEKIGIERSIQKLNTAHLI
LFVVQAHEPVEEEDLYIYSLVKDKNHIVVLNKADLGFWEGHRKLFPSFVLVSAKDGSGIE
ELKATILSNLGASVGEGLYISLRHADLLQKSLGVIKLILEKNLKELSPEILMLYLREVQL
YLEELLGAITTEELLGEIFSNFCIGK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaagggaacctatcgtagccatagctacaccctatggagaaagtgccattggc
gttgtaagactcagcggtctgggtgttttggaaaaggttttgccctttgtggagctaaaa
ggtaagctaaagcccaggtatgcccacttcgtgaaggtccttgacgcggagggaaatcct
atagacgaaggcataatgatctattaccagtctcccaaaagctacaccggtgaggatatg
gtggagttgtttttgcacggaaaccctttgatattaaaaaaggtggtagagctttttctt
cagaacggtgtaaggcttgcggagcggggtgaatttaccaaaagggcctttttgaacgga
aagatggacctccttcaggcggaggcggtgggagacctaatatccgccaagtctgagctt
gccctaaaaagtgccctaagacaactcagaggagacctatcccagctcattgttcccctc
agggaaaaaatccttaacctctgcgcctttgtggaggcaagcatagagtttgaggaacag
gacataccaaccctgagcgaggaagaaataaaaagccaacttgaggaaataaaaaccaaa
atagaggaattgcttgccacagtccgaacgggggagtttttgagaaaaggcgtcaatctg
gcaatagtgggcaagcccaatgtaggtaaatcctctctctttaacaaattgctgggcacc
caaagggcaatcgtcacggacattccgggcaccacgcgagactttttgcaggagcctttg
aacttggaaggcatcccaataaacctcatagataccgcaggcattagacattctgaggat
ccagtggaaaaaattggcatagaaaggagcatacaaaagctaaacaccgcccatcttata
ctctttgtggttcaggctcacgagcctgttgaagaggaagacctgtacatctactccctt
gtgaaggataaaaaccatatagtggttctaaacaaggcagaccttggcttttgggaaggg
cacagaaagttatttccgagctttgtactggtcagtgccaaagatggaagcggtatagaa
gagctaaaggccactatcctttccaacttgggtgcgagcgtgggcgaagggctttatatt
tccctgaggcatgcagacctcttgcaaaaatccttgggtgttataaaattaatactggaa
aaaaacttaaaagagttgtcgcccgagatcctaatgctatacctcagagaggttcaactt
tatttagaagagcttttaggtgctattacaacggaggagcttttgggagagatattttct
aacttttgcataggcaaataa
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