Thermocrinis ruber: THERU_00410
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Entry
THERU_00410 CDS
T03001
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
trd
Thermocrinis ruber
Brite
KEGG Orthology (KO) [BR:
trd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trd03019
]
THERU_00410
03009 Ribosome biogenesis [BR:
trd03009
]
THERU_00410
Messenger RNA biogenesis [BR:
trd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
THERU_00410
Ribosome biogenesis [BR:
trd03009
]
Prokaryotic type
rRNA processing factors
THERU_00410
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Anti-TRAP
S1
CvfB_1st
Motif
Other DBs
NCBI-ProteinID:
AHE95365
UniProt:
W0DEN2
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All DBs
Position
68743..70104
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AA seq
453 aa
AA seq
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MAKKLVVLGLKNDVFSFLLEGDEVVKIRLDSKDRRRVVGSVFLGKVKRLAKGMGGVFVDI
GLDKEAYLPLKGEMLKVGDWILVQGVRDELGEKGIKLTNRIKIPGKYIVYMPETQEVKCS
SKLSTEDKCKLLDLIKEDLQNEGVILRTASARASKEDILRELQQLRGLYQSLKAKLRGNK
KPQLLLEELPQHLELIRSHWSDLEGIFCNDVSLWHQISNFLEGFEPSLLNKLYYVKDASA
LAVSFGLREALKRALQKRLWLKGGGYIVIEETEAMTVIDVNSGDACGDTQEENALRTNLE
AVKEIAKQIILRDLGGIIMIDFIDMKEQGNKDKVINALKEALGEDLCNVQIYGFTKLGVL
EMARRKSGKSLTQMLTEDCPHCNGSGRVKGDNLYVLELDLDIENHGAGFVEVYVPKGRKG
AVESYINAKKMDHVVIIEDENLDYNKYEIRHVR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaagttagtggtcttaggcttaaaaaacgatgtattttcctttcttttggaa
ggagatgaggttgtaaagatacggcttgatagcaaggatagaaggagggttgtgggaagc
gtcttcttgggaaaggtaaaaagattggcaaaaggcatgggaggtgtctttgtagatata
ggtctagacaaagaggcatacctacctttgaaaggagaaatgttaaaggttggagattgg
attttggtccagggggtgagggatgaactgggagaaaagggtataaagcttaccaatcgt
ataaaaatacccggtaaatacatcgtgtatatgccagaaactcaggaggtgaaatgttct
tcaaagctatccactgaggataagtgtaagcttctggatcttataaaagaagaccttcag
aatgagggagtaatacttagaactgcttcagctagggcaagtaaagaggacatactgagg
gagctacagcaattgagagggctttatcagagcctaaaggcaaagctaagaggcaataaa
aaacctcagcttcttttggaagaactgccccaacatttggaactgataaggtcccactgg
tcggaccttgagggtatcttttgcaacgatgtttcgctttggcatcagatatcaaacttc
ttggaaggctttgagccgtccctcttgaacaagctttactatgtgaaagatgcaagtgca
ttagcagtatcttttggtctgagggaagccctgaaaagagcccttcaaaaacgcctctgg
ctaaagggaggaggctacattgtaatagaagaaaccgaagccatgactgttatagatgta
aacagcggggacgcctgcggtgatacccaggaggaaaacgccctaaggaccaacttggag
gcggtaaaagagattgccaagcagatcatcctaagggacctgggcggaataataatgata
gactttatagacatgaaggaacagggcaataaagataaggtgataaacgccctcaaggaa
gccctcggagaagacctttgcaatgttcagatatacggttttaccaagttgggtgtgttg
gagatggcaagaaggaaaagtggaaaaagcttaacccaaatgctgacagaggattgtccc
cactgtaatggttctggcagggtaaagggagacaatctttatgtccttgagcttgacttg
gatatagaaaaccatggcgctggttttgtggaagtttatgtgcccaagggtagaaaggga
gcagttgaaagttacataaatgcaaagaaaatggatcacgtagttatcatagaggatgaa
aacttggattacaataagtatgaaatcagacatgttaggtag
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