Thermocrinis ruber: THERU_01145
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Entry
THERU_01145 CDS
T03001
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
trd
Thermocrinis ruber
Brite
KEGG Orthology (KO) [BR:
trd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
trd01011
]
THERU_01145
Enzymes [BR:
trd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
THERU_01145
Peptidoglycan biosynthesis and degradation proteins [BR:
trd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
THERU_01145
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Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_2
ANAPC3
TPR_1
TPR_19
TPR_16
TPR_8
TPR_7
TPR_11
TPR_12
Rapsyn_N
Motif
Other DBs
NCBI-ProteinID:
AHE95498
UniProt:
W0DEN0
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All DBs
Position
complement(207507..209156)
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AA seq
549 aa
AA seq
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MDRIALFLIFVLFSFAFSQLPQEYALLSEFLQKRDLALGERLLRDYPNAVFVDDMRLLLA
EEYYRRGELRRAEELLKEINPRALKFDYVERYAHLWRAMNLDKKTALLNLPHLFKDYIPE
VFLTEEEKLKVGQELIKRRQYREAINLLQDIPKACSLLGEAYERLRLYKEAMEVLKNCDG
REGTLRYVKVVFNVSEEEFKRALLRLKGYEEYNQALFYAGRLSLYRENYQKALEWFSMME
EGYQKHFQSGLVLFILEDYQRAVDAFQKALNLSSSEEEKAQAHFWLYKSYEKLGNFQKAG
EHLLKASKGTGFYSTMAKVQLGEPVATRGLKAFFASAEETSMASIIRSITEAGFLHYARL
EAFRNIDKFTTSDIIAIQKFDPFLAIRLAVRRFGIRSDIYQYVAYPTPYREFVEEAYKTF
GVDKNLIWAVMRQESLFDPLAISPSGAKGLMQLMDFTAREVSQRYRIPNNVFSPRENILL
GTAYLKEIIELWNGDWVRAIASYNAGPNRVRGFIQHADPYVFIETIPISETRNYVKRVLE
NYYIYRALN
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
gtggatcgtatagcactttttctgatttttgtgctgttttcctttgccttttcccaactt
cctcaggagtatgcccttttgtctgagtttttacaaaaacgggatttagccctgggtgaa
aggcttttgagggactatcccaacgcagtttttgtggatgatatgaggcttttgctggcg
gaggaatactaccggaggggagaattaaggagggctgaggagcttttgaaggagatcaat
cccagagctttgaagtttgactatgtggaaagatacgcccacctctggagggctatgaac
ctagataaaaaaaccgccctgttgaaccttccacacctcttcaaggattacataccggag
gtttttctaactgaggaggaaaagttaaaggttggacaagagcttataaaaagaagacaa
tacagagaagctataaacctattgcaggacatacccaaagcttgctcccttttgggagag
gcttatgaaagattgagactgtacaaagaggccatggaagtgctcaaaaactgcgacggt
agggaaggaaccttaaggtatgtaaaggtagtttttaatgtatccgaggaggagttcaaa
agagcccttcttaggcttaaaggctatgaagaatacaatcaagccctattttacgcaggt
cggctctctttgtacagggaaaattatcaaaaggctttggagtggttttctatgatggaa
gagggctatcaaaagcactttcaatcagggctggttcttttcatactggaggactaccag
agggcagttgatgcctttcagaaggctttgaacctatcttcttcggaggaagaaaaggca
caggcacacttttggctttacaaaagctacgaaaagttgggaaattttcaaaaagcggga
gagcatcttttgaaggcatcaaagggtacaggattttattcaacgatggcaaaggtgcaa
ctgggagaaccggtagctaccagagggttaaaggcattttttgccagtgcagaggaaacc
tccatggcaagcatcataagaagcataacagaagcgggctttttgcattatgcccgtttg
gaggctttcagaaacatagacaaatttaccacatcggacatcattgccattcaaaagttt
gaccctttcttagccataaggctggcggttaggaggtttggcattaggtctgatatatac
cagtacgtagcctaccctacaccctacagggagttcgtggaggaagcttacaaaaccttt
ggtgtggataaaaatcttatatgggcggttatgaggcaggagagcttatttgacccattg
gctatatctcccagcggtgcaaagggacttatgcaactaatggactttaccgcaagggaa
gtttcccaaaggtacagaattcccaacaatgtcttttctccaagggaaaacatactcttg
ggcaccgcatacctaaaggaaattatagagctttggaatggggattgggttagggcaata
gccagctacaacgcaggaccaaaccgagttagaggctttatccagcacgcggacccttat
gtgttcatagagaccattcccataagcgaaacaagaaactatgtaaagcgtgtgctagaa
aactattacatatacagagccctaaattaa
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