Thermocrinis ruber: THERU_01960
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Entry
THERU_01960 CDS
T03001
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
trd
Thermocrinis ruber
Brite
KEGG Orthology (KO) [BR:
trd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trd03400
]
THERU_01960
Enzymes [BR:
trd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
THERU_01960
DNA repair and recombination proteins [BR:
trd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
THERU_01960
Prokaryotic type
THERU_01960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Methyltransf_3
UBX7_N
Motif
Other DBs
NCBI-ProteinID:
AHE95635
UniProt:
W0DFG6
LinkDB
All DBs
Position
360639..362009
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AA seq
456 aa
AA seq
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MEQEFTGRVKVINRRQFNTNGKYIIYWISHSHRAHFNHSLEFAIELSNQSGKPLLVYFLI
TDKYKYSNARYYKFMLDGILEAKKSVEERGIKFAIEKVNDIRQRIIELSENAYALITDKA
YLKYHRKLNKYIADRLDVPVYEIESDVCVPVEIASDRQEPYAFTFRKKIYSLLDKYIVEL
KPREPKIKSVSFDFGIEEIAFNNSLEILNILNIDKSVSLSPFVGGYSQARKYLEEFIEKK
LHRYKEFRSHPELDYQSNLSPYLHFGQISPIEVVLEVLSKYGRNDENVDSFFNELIVWRE
LARNFCYYNPNYNQYEGIPEWAKETLEEHKNDKREYIYTIEELENAKTHDEYWNSAQLEL
LKTGKMHNYMRMYWCKKLIEWTDDPKKAFDIACYLNDKYELDGRDPNGYAGISWCFGTHD
RPWKERKIFGKIRYMSASGLEAKFDIKKYVEKVKNL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagaattcacaggaagagtaaaggttataaaccgcagacagtttaacacaaat
ggcaaatacataatatactggatttctcacagccacagggcacacttcaaccatagcctt
gagtttgccatagagctgtcaaaccaaagcggaaaaccactattggtatacttcctaata
acagacaagtataaatactcaaacgcacgatactacaaatttatgttggatgggatttta
gaagccaaaaaatccgtagaagagagagggataaagtttgctatagaaaaggtaaatgat
attagacaaaggattatagagctatcagagaatgcctatgctttgattacagataaagca
tacttgaagtatcacagaaagctaaacaaatacatagcggacagattagatgttccagtg
tatgaaatagagtctgatgtgtgcgttccagttgagattgcatcagacaggcaagaacct
tatgcctttacctttagaaaaaagatttacagtttgttggacaaatacattgttgaacta
aagccaagggagccgaagattaaatcggttagctttgattttgggatagaggagatagct
ttcaacaactccttggagattttaaacattctcaacatagacaaaagcgttagcttatca
ccttttgtgggaggctacagtcaagcaagaaaatacttggaggagtttattgagaaaaaa
ctgcatagatacaaagagttcaggtctcatccggagcttgactatcagtcaaaccttagt
ccttatttgcactttggacagatctcgcccatagaagtggtccttgaggttttatcaaag
tatggaaggaatgatgaaaacgtagatagcttttttaacgagcttatagtttggagggag
cttgcgaggaacttttgctactacaatccaaactataatcagtatgaaggtattccggaa
tgggctaaagaaacattggaagaacacaaaaacgacaagagggagtatatttacacgatt
gaagagcttgaaaatgcaaaaactcacgatgaatattggaattccgcacagttagaactt
ttgaaaacagggaagatgcacaactacatgagaatgtattggtgcaaaaagcttatagaa
tggacggatgacccaaagaaagcctttgatatagcgtgctatctgaacgataaatacgag
cttgatggaagggacccaaacggttatgcgggaatatcttggtgttttggaacccacgac
agaccttggaaagagagaaaaatctttggaaaaatccgatacatgagtgcatcgggctta
gaagcaaagtttgacattaaaaagtatgtagaaaaagtaaagaacttatga
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