Thermocrinis ruber: THERU_03125
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Entry
THERU_03125 CDS
T03001
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
trd
Thermocrinis ruber
Pathway
trd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
trd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
THERU_03125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trd03400
]
THERU_03125
DNA repair and recombination proteins [BR:
trd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
THERU_03125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Nore1-SARAH
SHE3
DUF6470
MS_channel_2nd
ParE_toxin
Spectrin_SESTD1
COG2_N
Spectrin_5
Motif
Other DBs
NCBI-ProteinID:
AHE95835
UniProt:
W0DG25
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Position
569919..572180
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AA seq
753 aa
AA seq
DB search
MREKDFSNLELWKVFERLKGYFNSKATEKFLQTLKPYIDVEGLRQEIQLVEDFLAVEESL
TLYPFGDIEPYIKKSVLQDATLSLEEILEIYKVIKLIRDARKALGAHVPLRKSLGNLLKT
LYHFPQIEGIIESTIDQRGFVKDSASQELATIRKKIRDLEKEVSKRLENILNRPDADRLL
SDRIITIRNNRYVLPVKTTEINKIVGIVHGTSSSGYTTYLEPHSVVELNNRLVVLKEEEE
EEVKKVLKRITSYIGEFSTKLMSAYYTLLKLDYLKAVARFSKEIGGKFPKLSDAKIFLKS
VRHPLLVFTKDHVVPIDIKIEGKKGLVLTGPNTGGKTVALKSLGLCALMFQFALPIPIEE
GELPVFEGIYTDIGDEQSIEQNLSTFSAHVSNLAEFLPLVNEKSLVLLDELGAGTDPMEG
SALSIGVLEYLKNKKAYVFATTHHTPVKLYALESDYYTPASVSFDKETLEPTYHILYDAV
GSSMAFEIARRFGMPEEVLEYARKKMPAEFERFSKAKEDLEELIKEYQGKLKEVEQAKEE
LERMKAEYSSLLALSEEIKERAYREGMSRALQYLQEIEREAEELLKSARERQKIKQFVKE
KKQEVMKELNEEPIKVGDWVEFMGSKGRVLEVKEEKVQVSFGGVKAWIEKQKLKKAPPPV
VEQEEYSLEVNKRFPTEINLIGLNTEEALYKLESFLKEAKALGIKSVKVIHGTGVLKRVV
EDFLEGSDLVVFRREGYPREGGAGVSVVFLEKP
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
gtgagggagaaggacttttccaacttagagctgtggaaggtctttgagaggctcaaggga
tacttcaattcaaaggcaacggagaaattcttgcaaactctaaaaccttatatagatgtg
gaggggctaaggcaagaaattcagctggtggaggactttcttgcggttgaggaatctttg
actctttatccctttggagacatagagccctatataaaaaaatctgtcctgcaggatgca
accctcagcttggaggaaatattagagatatacaaagttataaagctcataagggacgca
agaaaagcccttggtgcccatgtgccccttaggaagagtttggggaaccttctaaaaacc
ctctatcactttccgcagatagaaggcatcatagagagcaccatagaccagaggggcttt
gttaaagacagtgccagccaagagttagcaaccatcagaaagaagataagggatttagaa
aaggaggtctccaagaggttggaaaacatcctcaaccgtcccgatgcagacaggcttctc
tcagacaggatcataaccataaggaataaccgctatgttttgcccgtaaagactacggag
atcaacaagatcgtaggcatagtgcatggcacttcgtcttctggatacaccacctacttg
gaacctcacagtgtggtggaattaaataaccgccttgtggtattaaaggaagaggaggaa
gaggaggtcaaaaaggttctaaagcggatcacctcctacatcggagagttcagcacaaag
cttatgtctgcctactacaccctgctaaagctggattacctaaaggcggtagcccgcttt
agcaaggaaatagggggcaagtttccaaagctttcggatgctaagatttttttaaagtcc
gtcaggcatccccttttggtattcaccaaggaccatgtggtgcctatagatataaagatt
gagggtaagaaagggcttgtccttaccggtcccaacacgggtggaaagacggtagcccta
aagtcccttgggctgtgtgccctcatgttccagtttgcactgcccatccctatagaggag
ggagaattgccggtttttgaaggcatatacacagatataggagatgaacagagcatagag
cagaacctttccaccttttctgcccatgtctcaaacttggcagagtttttgccactggtt
aatgaaaaaagcttggtgcttttggacgagctgggcgcaggaacagaccccatggagggc
tctgccttgagcataggtgtccttgagtatttaaagaacaaaaaggcttatgtctttgcc
acaacacaccatacacccgtcaagctttatgctttggagtctgactactacacacccgcc
agcgtatcctttgacaaagaaaccttagagcccacataccatattctttacgatgcggtg
ggtagcagtatggcctttgagatcgccagaaggtttggtatgccagaggaggttttggaa
tacgcccgcaaaaagatgcccgcagagtttgaaagattctcaaaggctaaggaagactta
gaagagctgataaaagagtatcagggaaagctaaaggaagtggagcaggcaaaggaagag
ttggaaaggatgaaggcagaatattcgtccttgcttgccctctcggaagagatcaaggaa
agggcttacagggagggaatgtctcgggctttgcagtatttacaggagatagaaagggag
gcggaggagctcttaaaaagcgcaagggaaaggcagaagataaagcagtttgttaaggaa
aagaagcaagaggttatgaaagaactgaatgaggaaccgataaaggtaggcgattgggtg
gagtttatgggctcaaagggaagggttctggaggtgaaggaggaaaaagtgcaggtgtcc
tttggtggtgtaaaggcttggatagaaaaacagaagctaaagaaagcacctccacccgta
gtagagcaggaggaatactcccttgaggtcaataagagatttcctacggagataaatcta
ataggacttaacacggaggaagccctttataagcttgagtctttcctgaaggaggctaag
gcgcttgggataaagagcgtaaaggtaatccatggcacgggggttttaaaaagggtggtg
gaggactttttggaaggttcagatttggtagtttttcgtagggagggatacccaagggaa
gggggagcgggcgtttcggtggtttttttggaaaagccataa
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