Thermocrinis ruber: THERU_03320
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Entry
THERU_03320 CDS
T03001
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
trd
Thermocrinis ruber
Brite
KEGG Orthology (KO) [BR:
trd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trd03009
]
THERU_03320
Enzymes [BR:
trd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
THERU_03320
Ribosome biogenesis [BR:
trd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
THERU_03320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AHE95871
UniProt:
W0DC72
LinkDB
All DBs
Position
complement(605825..606760)
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AA seq
311 aa
AA seq
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MQEILEFLVEEEDRLDRFLARAYPDFSRSYLQRLIEEGYVLVENQVITKPSKRLKRGEKV
LLLVPEPEPLEIPPENIPIRIVYEDAHLLVVVKPCGMVVHPSPGYTTGTLVNALLYHVKD
LSSIGGVERPGIVHRLDKDTMGLMVVAKSDQVHRSLAEQFKERKVFKLYRAIVQGIVSWE
HKVVESSIGRHPIDRKKFAIVEGGKYAKSEFFVKERFPKHNATLLEVRLHTGRTHQIRVH
VSALGHPILGDRTYGFKPASVSKEILELMGNCHMLLSYKLGFFHPVDNKWLEFEVKDVEP
FSKVLNYLRAS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atccaagaaatccttgaatttcttgtggaagaagaagatcgtttggacagatttttggca
agggcttatccggacttttcaagaagctatctgcaaaggctaatagaggaggggtacgtt
ttggtggaaaaccaagttatcacgaaaccttcaaaaaggctaaagcggggggaaaaagtt
ttactcttggtgccagagcccgagcccttggagatccctcccgaaaacattcccataagg
atagtctatgaggatgcccatcttttggtggttgtcaagccctgtggtatggttgtgcat
ccttcgcccggttatactactggaacccttgtgaatgcccttctttatcatgtaaaagac
ctttcttccatcggtggtgtagaaagaccggggatagtccacaggttggacaaggatacc
atggggcttatggtggtggcaaagagcgaccaagtgcacagaagtttggcggagcagttc
aaagagagaaaagtctttaagctttacagggcaatagttcaagggatagtaagctgggaa
cacaaagtggtggaaagtagcataggaaggcatcccatagacaggaaaaaatttgcgata
gtggaaggcggaaagtatgccaagagtgagtttttcgtaaaggaaaggtttcccaaacac
aatgccacccttcttgaggtgagactccacacgggaagaactcatcaaatcagggtgcat
gtttctgcccttgggcatcccatactgggagacagaacttacggttttaaaccggcgagc
gtctcaaaggaaatccttgagttgatgggaaactgccacatgcttttgagctacaaactt
ggctttttccatccggtagataataaatggcttgagtttgaagtgaaggatgtggaaccc
ttcagtaaagtgctcaactacttaagagcttcttaa
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