Thermocrinis ruber: THERU_04320
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Entry
THERU_04320 CDS
T03001
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
trd
Thermocrinis ruber
Brite
KEGG Orthology (KO) [BR:
trd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trd03032
]
THERU_04320
03400 DNA repair and recombination proteins [BR:
trd03400
]
THERU_04320
Enzymes [BR:
trd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
THERU_04320
DNA replication proteins [BR:
trd03032
]
Prokaryotic type
DNA Topoisomerases
THERU_04320
DNA repair and recombination proteins [BR:
trd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
THERU_04320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
Toprim_4
HATPase_c_3
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
AHE96032
UniProt:
W0DFK1
LinkDB
All DBs
Position
complement(777095..779470)
Genome browser
AA seq
791 aa
AA seq
DB search
MGKEKLLSEEYKAEDIKAVTGLEHVRIRPSMYIGDVGERGLHHLIWEILDNAVDEHMAGY
ADRISIIIHEDNSVTVEDNGRGIPVDIHPEMGIPAVQMVFTILGAGGKFDKKAYKYSGGL
HGVGASVVNALSEWLVVEVYRDGKIYKQEYIRGVPVTEVQVVGSTTKRGTKITFKPDPEI
FETTKIKFDIVEKRVRELAYLNPECKFFLKDERSGREVFYHFTKGIEELVSYLAQGKERL
FEKVIRIKGEQEGVLVDIAFTYTRDYKEITESFVNNIKTVDGGTHVTGFRSGLTKAVMRA
LPSLKIQKELKETITGDDLREGLVAVISCKVLEPQFEGQTKTKLGNQNVKNITESIVYEQ
LSDFFEDNRDILRLTVEKAIEAALAREAAKKAKELVRRKSPLEDTTLPGKLADCSEKDPE
KCELFIVEGESAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKILSNEEIKAIVSSLGT
GIGEDMDLSKLRYHKIILMTDADVDGSHIRTLLLTFFYRYMPKIIEAGHLYIAQPPLYRV
KKGKMTVYLKDDRELENFLMEHIKKDVLLRDAEGKEYRGEKLLELLKTLKETEEGYRLLV
KKKGEEILEGLLKVKLREEDLRDPSLLDEKIRMLKEHLKNYEVSTRFNEAESAYELVFVD
KAMGRRVIVDADLLSSLTYKHLLEGIPIKAPVEVTFDKRSKIIDNLHSLFDGVMELVKGS
FEIQRYKGLGEMNPEQLWETTMNPATRRLLKVSIEDAIEADRIFNILMGEEVEPRREFII
AYAREVKNLDV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagaaaagctcctctccgaagaatacaaagcagaagatataaaagcagtaacc
ggtttagagcacgtcagaataagaccttctatgtatataggggatgtgggagagaggggt
ttgcaccacctcatctgggagatcctggacaacgcagtagatgagcatatggctggctat
gcggacaggatctccatcattatccacgaagacaactccgtaaccgtagaggacaacgga
aggggcataccggtagatatccatcctgagatgggtattcctgcggtgcagatggtcttt
accatactgggtgcgggtggaaaatttgacaagaaggcatacaaatactcagggggactt
cacggagttggtgcatctgtggtcaatgccctttctgagtggttggtggtggaggtttac
agagacggaaagatctacaagcaggagtatataaggggtgtgccagtcactgaagtgcag
gtggttggttccaccacaaagaggggcaccaagataacctttaagccagatccagaaatt
tttgagacaaccaaaatcaaatttgatatagtagaaaaacgcgtaagggagcttgcctat
ttaaacccagagtgtaagttctttttaaaggacgaaaggtctggcagggaggtcttttac
cactttaccaagggcatagaggagctggtttcctatttagcccagggaaaggaacgcctc
tttgaaaaggttataagaataaaaggagagcaggaaggagttttggtagacatagccttt
acttacacaagggattacaaagagatcacagagagctttgtgaacaacataaagactgta
gatgggggcactcacgtaacgggttttaggtctgggcttaccaaggcagttatgagggct
ctgcccagcctaaaaattcaaaaggagttaaaagaaaccattacgggggatgatctgagg
gaaggtttggtggcggtcatctcttgcaaggtgctagaacctcagtttgaggggcaaact
aaaacaaaactgggaaatcaaaacgtaaagaacataacagaatccatagtttatgaacag
ctttctgatttctttgaagacaacagggatatcctccggctcacagtggaaaaggctatt
gaagcggcgctggcgagggaggcggcaaagaaggcaaaggaactggtcaggagaaaatct
cccctggaggataccacactgcccggtaagttggcagactgctctgaaaaggacccagaa
aaatgcgagctctttatagtggagggcgaatctgcaggaggttccgccaaacagggaagg
gacaggaggtttcaggctatccttcctttaaggggtaaaatcctcaacgtggaaaaggca
aggcttgacaaaattctatccaacgaggagataaaggcgatagttagctccctgggtaca
ggcataggggaagatatggacctttccaagctcaggtatcacaagataatactcatgacg
gacgcagacgtggatggttctcacattagaacccttctcttgacgtttttctatagatat
atgccaaaaataatagaagcgggtcatctttacatagcccagcctcctctctacagggtc
aaaaaggggaaaatgaccgtctatcttaaggatgacagagagttggaaaactttttgatg
gaacatataaagaaggatgtccttctgagggatgcggaaggaaaggagtataggggagaa
aagctcttggagcttttgaaaaccctgaaggaaacggaggaaggatacaggctcttagta
aagaagaagggagaggagattttggaaggcttgctaaaggttaagctcagggaagaagac
ctgagagatccgagtctgctggatgaaaaaatacggatgttgaaagagcacctcaaaaat
tatgaagtatccacaaggtttaacgaggctgaatctgcctatgagctggtgttcgttgat
aaagccatgggtagaagagtcatagtggatgcggacctactctcttctcttacatacaaa
catctgttggaaggcattccaataaaggcacccgtggaggtgacctttgataagagaagc
aaaatcatagacaatcttcactctctctttgatggagttatggagcttgtaaagggtagc
tttgagattcagagatacaagggtttgggtgagatgaacccagaacagctttgggagacc
actatgaaccctgccacccggaggcttttgaaggtttctatagaggatgctatagaggca
gacaggatctttaacatactcatgggagaggaagtggagccaaggagagagttcataatc
gcctacgcgagggaggtcaaaaacttagatgtttaa
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