Thermocrinis ruber: THERU_07425
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Entry
THERU_07425 CDS
T03001
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
trd
Thermocrinis ruber
Brite
KEGG Orthology (KO) [BR:
trd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trd03032
]
THERU_07425
03400 DNA repair and recombination proteins [BR:
trd03400
]
THERU_07425
Enzymes [BR:
trd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
THERU_07425
DNA replication proteins [BR:
trd03032
]
Prokaryotic type
DNA Topoisomerases
THERU_07425
DNA repair and recombination proteins [BR:
trd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
THERU_07425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AHE96531
UniProt:
W0DDV7
LinkDB
All DBs
Position
complement(1337432..1339042)
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AA seq
536 aa
AA seq
DB search
MILFLVESFTKAKTISKYLGKDYLVKATGGHIKDLPEDRLGVDLETLNPTFLWRKGKKKL
FDEIKKSSLKAQLVLLGTDPDREGEAISYFLWEELKRVVNIPIRRVYFYEITKPALQKAI
KEQTNINMNLVKAQFARRVLDRLIGYLLSPELQKSLKTRGLSVGRVQSPALRLIVERERE
IQSFKKKKFYYIRALFEGFSAYLGVRFEKPDNAKPYLEKLKDVFFEVKEVQEWEEMVPPP
KPFNTPELQKTANERLDFSVEKTTRLAQLLYEEGYITYPRTDAHRMSPEKATEFLQWIEK
NYGVEYVGRLRKFREKAHVQSAHECIRPTSLVKKPPPGDSLELFELIVGRTLASLSTPAV
LKNTKVMLTPLTQGIPFEFIAKGRTLVFDGWTRFEDYDFMEEKLPKLEKGQILKPQKIIL
EERQTEPPKRYTEGSLVKKLESLGIGRPSTYATIIKTLKERGYVVVEKGYLKPTETSFLV
LDYLMENFPKLVDYQYTAKMEEVLDLVEEGKKDWKSAVRELFKEITDGNPYPNKLP
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgattctgttcttggtggaatctttcacaaaggcaaagaccataagtaagtatttggga
aaggactatttggttaaggcaaccggtgggcacattaaggatctacccgaggaccgattg
ggtgtagacttagaaacgctaaatcctacctttttgtggaggaagggaaaaaagaaattg
tttgatgagataaagaaaagtagccttaaagcccaacttgtgcttttgggaacggaccca
gacagagaaggagaagcaatatcctactttctttgggaagagttaaaaagggttgtaaac
atcccaataaggcgtgtgtacttttacgagatcaccaagcctgccctccaaaaggccata
aaggagcagacaaacatcaacatgaacttggttaaagcccagtttgccagaagggtcctt
gaccggctcataggctatcttctttcgccagaacttcagaaaagcttaaaaacaagaggg
ctctctgtaggaagagttcaatctcctgccctaaggctcatagtggaaagggagagggaa
atccagtcctttaagaagaagaagttttactacatcagagcgctctttgaaggattttct
gcctacttgggcgtgaggtttgaaaagccagataacgccaagccctacttggaaaagcta
aaagatgtcttctttgaagtcaaggaagttcaagagtgggaggagatggtgccaccgccc
aagccctttaacacacccgagctacaaaagaccgccaacgaaaggctcgactttagcgtg
gaaaaaaccacaaggcttgcccaactgctctacgaagaaggctacattacctacccaaga
acggacgcccaccggatgagtcctgaaaaggctacagagttcctccagtggatagaaaaa
aactacggtgtggagtacgtgggaaggttaagaaagttcagagaaaaagcccatgtgcag
tctgcccacgaatgcataaggcccaccagcttagtcaaaaaaccgccaccgggggatagc
cttgagctctttgaactgatcgtaggcagaactttggcaagtctttctactcctgcagtc
ctgaagaacaccaaggtaatgctaactcctttgacgcaaggtattccctttgagtttatc
gcaaagggaaggaccttagtctttgatggatggacaaggtttgaagattatgactttatg
gaggagaaactgcccaagcttgaaaaaggtcagattctcaagccacaaaagatcatcttg
gaagaaaggcaaacagagccaccaaaaagatacacggaaggctccttagtaaaaaaactt
gagagcttaggcattggaagaccctctacctatgcgacgatcataaaaaccctaaaagag
agaggctacgtggtggtggaaaagggctacctaaagcccacagagacctcctttttggtg
cttgactatcttatggagaactttccaaagctggtggattaccaatacaccgccaagatg
gaggaagtgctggacttggtggaggagggaaagaaggactggaaaagtgcagtcagagag
ctttttaaagagattacagatggaaatccttacccaaataaacttccctga
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