Trichoderma reesei QM6a: TRIREDRAFT_102458
Help
Entry
TRIREDRAFT_102458 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03440
Homologous recombination
tre03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TRIREDRAFT_102458
03460 Fanconi anemia pathway
TRIREDRAFT_102458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tre03032
]
TRIREDRAFT_102458
03400 DNA repair and recombination proteins [BR:
tre03400
]
TRIREDRAFT_102458
Enzymes [BR:
tre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TRIREDRAFT_102458
DNA replication proteins [BR:
tre03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
TRIREDRAFT_102458
DNA repair and recombination proteins [BR:
tre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
TRIREDRAFT_102458
Bloom's syndrome complex (BTR)
TRIREDRAFT_102458
FA (Fanconi anemia) pathway
TRIREDRAFT_102458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
ResIII
HRDC
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
18480399
NCBI-ProteinID:
XP_006961546
JGI:
Trire2_102458
UniProt:
G0R9B1
LinkDB
All DBs
Position
Unknown
AA seq
1690 aa
AA seq
DB search
MTRNNLSGHLTWLLKNAALSKPAARELPQASDSASFRFSQSQSASGRTAEPSQATTVSAG
GDRRTHQVQDSWSSNGPPKREEGSLGTEVVAVEDDDMGRLNLSAGSKKPSLLSQNGRLAT
PSSESHPSPGFDADFADFDVDDLEYMDLTRTTGASDESDEFGEDVKVWTEKDASWEAPLP
KSKKRKSADAGDAVAGADTQFPDVYQILGTSPPAPTPGRQSAKKVSSAVPKPQVPRKPIV
INRPQSVKAPSSKLPLVGSSSPLGRVANRRSPSPIKRTPEKDYAITSSERRKKAKVSGQR
SASPEPLTFDKHVHQTEHRQSDEYCIPDSDDEFVTPPSVPAAARKDQVKPVANPEEDDFI
MDVEDLPTIPEPRRKGSPLAPRRAQARDLELSHQSISETQSTATVDNGSETSHPQQSFTP
SSQTSRLLSRILSNPQLLAKRCDSLDKQIQQNDRDFMKAINDRLPKDKRDEIKAEKEALV
RQQKATQELDQSVKHYRSLHQQREAVAQQVARSYAEGANTDEQEARLDELTEHVETKERE
LSQMLAAAGINEANLLETLEYPATSRADDHIVVLGTQAGHGGMVNMSRSSRDVPLPLGGT
QVVHQTQLPEPVRSQLWNEANSAQRLTGGSGVLSPDDQNSRSEPFPRQSSRTTQLPNYAS
TSGPRSVPTLDHDVDAEEDFFSDIDDMDMQLLPKPAKKATLADTRKAPQRSRTQRAANEF
SDFSDDADMLAFAQDYDLRQSAREPPSDSRRAFSETSGNAVPAPKQKQVPKRQPPPDPSQ
TRIPAELMRHPWSADVQKTLKDRFRMKGFRQNQLEAINATLAGDDAFVLMPTGGGKSLCY
QLPAVVKSGKTRGVTIVVSPLLSLMQDQVDHMKALGIQAVAFNSECSPEYKRQVMSAFDE
RNPEHFIELLYVTPEMASKSPQFMNALQNLYRNKKFARIVIDEAHCVSQWGHDFRPDYKT
LGQLRAKFPQVPVMALTATATQNVIVDIKHNLRMKNCQVFSQSFNRPNLYYEVRPKGSNP
VVTQQIAALIKAKYPNVTGIIYTISRKQAEDVAQKLCEHGITARHYHAQITPSEKVEVQT
AWQKGQIKVVVATIAFGMGIDKPDVRYVIHHGIPKSLEGYYQETGRAGRDGKPSDCILFY
GKGDIRVLKKLILDGEGNNEQKERQMVMLNRVTAFCDNKADCRRTEVLRYFGEDFSPSQC
NKTCDNCQAGLVFEQQDFSEYAIAAIRIVQQQHRLTANQCADILIGRKYPDNEMQNSDDY
HGMAKGMKKHEMVRVIDRLSAEKGFHEDNVVGNHGVAIQYLQIGPAANQFLTGRRKLMLT
VQVSDSGDGDQSKAKRPKASRKQKEPANNVQSTYVSSPVNARRRRATVVDSDDESNLPTT
AHGYVNDGFVVSDEEMEDEGEEDLADEDEAFEPLPQHRPAKPTNSRSSSKQTPLAEPHPG
RLKLEDLPEIHQDMVDNFVQEARQLEERIRNRLDVRRPMFTDSQLQEMAINWTTSLDSMK
RIPGIDVDKVDKVGKKLISILEEYHKLYREIAAAESGGAGASASNLNQEIVDLISSDLEA
DEDEEEAMGMEEDSHYFAPKPPANVQAFHDRLQSLNSQPSQSRGRSYSRGGGGGGGGGRR
RYSGGKKWSRKGASGGGSQRRGSGSGARGGGSGGGGGGSSSRSGGGSSGGFKRDGKIVKK
SGGGIGLMPL
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaaataacctgtcaggccacctcacctggttgttgaagaacgccgccttatca
aagcccgccgctcgagagcttccccaagccagcgattcagcatcctttcgattttcgcaa
tcccagtctgcaagcggtcgtacggcagaaccaagtcaggctaccactgtatcagctgga
ggagacagacggacacaccaggtgcaggactcctggagctcaaatggcccgccgaagaga
gaagagggttccctgggtacagaagtggtggcagtagaggacgacgacatgggccggcta
aacttgtctgccgggtcaaaaaagccttcgcttttgtcacaaaatggcagactggcaacg
ccgtcatcagaaagccacccatctccaggattcgacgctgattttgcggacttcgatgtt
gacgatctcgagtacatggacctcacgagaacaactggcgcctctgatgaatctgatgag
tttggcgaggatgtcaaagtctggaccgaaaaggacgcatcctgggaggcaccgttgccc
aagtcaaagaagaggaagagtgccgacgctggtgatgctgtcgctggtgccgatactcag
tttcctgatgtctatcagattctgggaacctctcctcctgccccgactcccggtcgacag
tccgcaaaaaaggtcagttctgctgtgccaaaacctcaagttccacggaagcccattgtt
attaatcgaccacagagtgtcaaagcaccgtcttccaaattacctttggtagggtcgtca
tctcccttggggcgtgttgccaatcgaagatcaccgtctcctatcaagcgaactccagag
aaagactatgccatcacgagctccgagagacggaagaaggcgaaagtttctggtcagcgt
tctgcgtctccagagcctctaacttttgacaagcacgtccatcagactgagcatcgccaa
tccgacgagtattgcattcctgattctgacgacgaatttgtgaccccgccgtcagttcca
gctgctgcgaggaaggaccaggtgaagccagtagccaacccggaggaagatgacttcatc
atggatgttgaagacctacctacgattccagaacccaggagaaaaggttcaccactggct
cctcggcgagcacaggccagagacctggagctatctcaccaaagcatatccgaaactcag
agtacagccactgtcgacaatggaagcgaaaccagccatccgcagcagtcattcacgcca
tccagtcagacatcaagactattgtccagaatattgtcgaatccgcagcttctagcgaaa
cgatgcgattctttggataagcagatccagcagaatgaccgggacttcatgaaagccatc
aatgacagattgccgaaggacaagagggacgagatcaaagcggagaaagaagcgctcgtc
agacaacagaaggcgactcaggagctcgatcaatcagtgaagcactacagaagcttacac
cagcagcgagaagcagtggcccagcaggtagcccgatcatacgccgaaggcgcaaacaca
gatgaacaagaagcccgactggatgagcttaccgagcacgtcgagacgaaagagcgagag
ctctcccagatgctggccgcagcaggcatcaatgaagccaacctactagagactctggag
tatcctgccacgagccgggccgatgaccatatcgttgtgctcggcacccaggctggtcat
ggaggcatggtcaacatgtcgcggagttcaagagacgttccattgcctcttggagggact
caggtcgttcaccagacccagctcccggagcccgttcggtcacagctctggaacgaggcc
aattcggctcagaggttgacaggtggaagtggggttctatccccagatgaccagaactca
cgatctgagccatttccacgacagtcatcccggactactcagttgccgaattacgcctcg
acatctggtccaagatcagtgccgacactggatcatgatgtggacgccgaggaagatttc
ttctctgacattgatgacatggatatgcagctgctgcctaaaccggcgaagaaggccact
ctagccgacacacgcaaggcacctcagaggagtcgcactcagcgcgcagcaaatgagttt
agcgacttcagtgacgatgctgatatgcttgcatttgctcaagactacgatctacgacag
tctgctcgcgaaccgccctcggactcccgacgagcattttccgaaacatctggaaatgct
gtgccggcgccgaagcagaagcaggttcctaaaagacaaccgcctcccgatccatcccag
acaaggataccggcggagctcatgaggcatccttggtctgcagacgtacagaaaacgttg
aaagatcggttccggatgaaggggttccggcaaaaccaactggaagcgatcaacgccacc
ctcgcaggagacgatgcctttgtgctaatgccaacgggtggtggaaagtccctctgctat
cagcttccggctgtggtaaagtccggcaaaacaagaggtgtcacaatcgtcgtatcccct
ctgctgagcttgatgcaagatcaagtagatcacatgaaagctttggggatacaggccgtt
gcgttcaacagcgagtgctcgccagagtacaagcggcaagtcatgtctgctttcgatgag
cggaatccagagcacttcatagagcttctctatgtcacccccgaaatggctagcaaaagc
cctcagttcatgaacgccctgcaaaatctgtaccggaacaagaaatttgcccgcattgtc
atcgatgaggctcactgcgttagccagtgggggcatgactttcgtcctgactacaagact
ctgggacagcttcgagccaagttccctcaggtccctgtcatggcattgacggccactgcc
acacaaaacgtcattgtcgacatcaaacacaatcttcgtatgaagaactgccaggtcttt
tcgcaaagcttcaaccgcccgaacctgtactacgaggtccggcccaaaggctccaacccg
gtggtgacgcagcagattgctgccttgatcaaagccaaataccccaacgttactggaatc
atctacacgatttcgcggaagcaggccgaggatgttgcccagaagctctgtgagcacggc
ataacggcgcgtcactaccatgctcaaatcacgccctcggagaaggtggaagtacaaact
gcgtggcaaaagggccaaatcaaagtcgtcgtggctacgattgctttcgggatggggatt
gataagccagacgtgagatatgtgatccaccatggcatcccaaagagcttagaaggctat
tatcaggaaactgggcgtgcggggcgagacgggaaaccctccgactgtatcttgttctac
ggaaaaggggacataagagtccttaagaagctgattctagacggagagggcaacaacgag
caaaaggaaagacagatggtgatgctgaaccgcgtgacagcattctgtgacaacaaggcg
gattgtcgacgaaccgaggtccttcgctactttggagaggactttagtccgtcacagtgc
aacaagacttgcgacaattgccaggctgggcttgtattcgagcagcaggacttttccgaa
tacgccatagccgccatccgaattgtccagcagcagcacaggctgaccgcaaaccagtgt
gcggatattctgattgggagaaagtacccggacaatgaaatgcagaattcggacgactat
cacggcatggccaaggggatgaagaagcacgagatggtccgcgttatcgaccgcctctcg
gctgagaagggcttccatgaggacaacgttgttggcaatcatggagttgctattcaatat
ctccaaatcgggcctgccgccaaccagtttttgacggggagacgaaagcttatgctgacg
gtccaggtttctgacagtggcgatggagaccagtcgaaggccaagagaccaaaagccagc
aggaagcagaaagagccggctaataacgtgcaatccacatatgtctcgtctccagtcaac
gcacgcagaagaagagcgacagtggttgacagtgacgacgagtccaacctacccaccacc
gcgcacggctatgtgaatgatggctttgtcgtctcggacgaagagatggaagatgaaggc
gaagaggacttggccgatgaggacgaagcctttgagccactccctcagcaccgaccagca
aaaccaaccaactcgcgctccagctccaaacaaacaccactggccgaacctcatccaggc
agactgaagctggaggatttgccagagattcatcaggatatggtggataatttcgttcaa
gaggcacgccaactggaggagcgcattcgtaacaggcttgacgtgagacgaccgatgttt
acggactctcagttgcaagaaatggccattaactggactacctcactcgacagcatgaaa
cgcatccctggcattgacgtcgacaaagttgacaaggttggcaagaagctgatatcaatc
ttggaggaataccataagttatatcgcgagattgctgcggcggagtctggtggtgccggc
gcatcagcttccaacttgaatcaagaaatagtggacctgatcagttcggatctcgaggct
gatgaggatgaagaggaggccatggggatggaagaggactctcactactttgcgccaaaa
ccacccgcgaatgtgcaagcatttcacgacaggctgcagagcttgaatagccagccgagc
caatccaggggcagatcatacagccggggaggaggaggaggtggtggtggcgggcgaagg
agatactctggtgggaaaaaatggtccaggaaaggggcctctggtggaggctcccagcgc
cgaggtagtggttctggcgcgagaggcggcggctccgggggcggcggcggtggttcgtca
tctcgatcaggcggagggagcagcggcgggttcaagcgcgacggcaagatcgtcaagaag
agtggaggagggattggtttgatgcctttatga
DBGET
integrated database retrieval system
