Trichoderma reesei QM6a: TRIREDRAFT_103049
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Entry
TRIREDRAFT_103049 CDS
T02991
Name
(RefSeq) glycoside hydrolase family 28
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tre
Trichoderma reesei QM6a
Pathway
tre00040
Pentose and glucuronate interconversions
tre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
TRIREDRAFT_103049
Enzymes [BR:
tre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
TRIREDRAFT_103049
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
ACS_CODH_B_C
Motif
Other DBs
NCBI-GeneID:
18480542
NCBI-ProteinID:
XP_006961351
JGI:
Trire2_103049
UniProt:
G0R949
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MLKLSLFLGAVTASLCVQAHAVPPPTVTQAPKLEDRATTCTFSGSNGASSASKSQKSCAT
IVLSNVAVPSGVTLDLSDLNDGTTVIFEGTTTWGYKEWSGPLLQIEGNDITIQGASGAVL
NPDGARWWDGQGGNGGKTKPKFFAAHDLTSSSITNLYIKNTPVQAVSVNGVNGLTITGMT
IDNSAGDSGGGHNTDGFDIGSSSNVVISGAKVYNQDDCVAVNSGTNITFTGGLCSGGHGL
SIGSVGGRDDNTVQTVTFSNSQVTKSANGIRIKATAGKTGTIKGVTYTGITLSSITGYGI
LIEQNYDGGDLHGSPTSGIPITNLVLQNISGSNGVVSSGNNIAIVCGSGACSNWTWSNVV
VTGGKKYGSCQNVPSPATC
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagctatcactttttctcggagctgttacagcttcactctgcgtgcaagctcac
gctgtgcctccgcccaccgtcacccaagcacccaagctcgaagatcgagccaccacctgc
accttctccggctccaatggcgcatcgtcggcgagcaagtcgcagaagtcgtgtgcgacc
attgtgctctcgaacgttgccgttccttctggggtgacgctcgatctcagtgatttgaac
gatggcacgaccgtcatcttcgagggcaccacgacttggggctacaaggaatggtccggc
cctctcctccagatcgaaggcaacgacatcaccatccaaggcgccagcggtgctgttctg
aaccccgatggcgcccgttggtgggatggccaaggaggcaacggcggcaagacgaagccc
aagttctttgctgcccatgatctgacctcctcgtccatcaccaacttgtatatcaagaac
acgccagttcaggccgtcagcgttaatggtgtgaatgggctgactattactggcatgaca
attgacaacagcgctggtgatagtggtggcggacacaatacagacggctttgatattggc
tctagctccaatgtcgtgattagcggagccaaggtttataaccaagatgactgcgttgct
gtcaattctggcacgaacatcaccttcactgggggtctttgctccggaggccacggcttg
tcaatcggcagtgttggcggtcgagacgacaacacagtccaaacagtcacattttccaac
tcgcaggtcactaaatcagccaatggcatccgtatcaaggccaccgccggtaaaactggc
accatcaagggagtcacctacactggcattactctgtcctcgatcacaggctacggaatt
ctgattgagcaaaactacgacggtggtgatcttcatggaagcccaacgagcggcatcccc
atcaccaacctggtgctgcagaacatctctggaagcaacggtgttgtatccagtggaaac
aacattgccatcgtctgtggcagtggagcttgttccaactggacttggagcaatgtcgtc
gtcactggcggaaagaagtacggcagctgccagaatgtgccgagtcctgctacttgttaa
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